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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001291780.2 → NP_001278709.1 RNA-binding protein 38 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (c).
- Source sequence(s)
-
AL109955
- UniProtKB/Swiss-Prot
-
Q9H0Z9
- Conserved Domains (2) summary
-
- TIGR01628
Location:46 → 269
- PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
- cd12384
Location:34 → 141
- RRM_RBM24_RBM38_like; RNA recognition motif (RRM) found in eukaryotic RNA-binding protein RBM24, RBM38 and similar proteins
-
NM_017495.6 → NP_059965.2 RNA-binding protein 38 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) lacks an alternate in-frame exon in the 5' coding region, compared to variant 3, resulting in an isoform (a) that is shorter than isoform c.
- Source sequence(s)
-
AL109955
- Consensus CDS
-
CCDS46617.1
- UniProtKB/Swiss-Prot
- A6NDK1, A6NMU6, Q15350, Q15351, Q9BYK3, Q9BYK4, Q9H0Z9
- Related
- ENSP00000348538.5, ENST00000356208.10
- Conserved Domains (2) summary
-
- TIGR01628
Location:46 → 237
- PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
- cd12384
Location:34 → 109
- RRM_RBM24_RBM38_like; RNA recognition motif (RRM) found in eukaryotic RNA-binding protein RBM24, RBM38 and similar proteins
-
NM_183425.3 → NP_906270.1 RNA-binding protein 38 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region, and also lacks another exon that results in a frameshift in the 3' coding region, compared to variant 3. The encoded isoform (b) has a distinct C-terminus and is shorter than isoform c.
- Source sequence(s)
-
AL109955
- Consensus CDS
-
CCDS46618.1
- UniProtKB/Swiss-Prot
-
Q9H0Z9
- Related
- ENSP00000407848.2, ENST00000440234.6
- Conserved Domains (1) summary
-
- cd12384
Location:34 → 109
- RRM_RBM24_RBM38_like; RNA recognition motif (RRM) found in eukaryotic RNA-binding protein RBM24, RBM38 and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000020.11 Reference GRCh38.p14 Primary Assembly
- Range
-
57391396..57409333
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011528885.4 → XP_011527187.1 RNA-binding protein 38 isoform X1
- Conserved Domains (1) summary
-
- cd12384
Location:34 → 141
- RRM_RBM24_RBM38_like; RNA recognition motif in eukaryotic RNA-binding protein RBM24, RBM38 and similar proteins
-
XM_005260446.5 → XP_005260503.1 RNA-binding protein 38 isoform X3
- Conserved Domains (1) summary
-
- cd12384
Location:34 → 141
- RRM_RBM24_RBM38_like; RNA recognition motif in eukaryotic RNA-binding protein RBM24, RBM38 and similar proteins
-
XM_047440258.1 → XP_047296214.1 RNA-binding protein 38 isoform X2
Alternate T2T-CHM13v2.0
Genomic
-
NC_060944.1 Alternate T2T-CHM13v2.0
- Range
-
59169162..59187091
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054323628.1 → XP_054179603.1 RNA-binding protein 38 isoform X1
-
XM_054323630.1 → XP_054179605.1 RNA-binding protein 38 isoform X3
-
XM_054323629.1 → XP_054179604.1 RNA-binding protein 38 isoform X2