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    spag17 sperm associated antigen 17 [ Danio rerio (zebrafish) ]

    Gene ID: 561115, updated on 2-Nov-2024

    Summary

    Official Symbol
    spag17provided by ZNC
    Official Full Name
    sperm associated antigen 17provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-081104-362
    See related
    AllianceGenome:ZFIN:ZDB-GENE-081104-362
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkey-208b23.5
    Summary
    Human ortholog(s) of this gene implicated in spermatogenic failure 55. Orthologous to human SPAG17 (sperm associated antigen 17). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See spag17 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    39
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (13033814..13064335, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (12993077..13026811, complement)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene novel protein similar to H.sapiens TMEM77, transmembrane protein 77 (TMEM77) Neighboring gene DENN/MADD domain containing 2Da Neighboring gene uncharacterized LOC101886593 Neighboring gene SAP30 binding protein Neighboring gene integrin, beta 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    sperm-associated antigen 17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      13033814..13064335 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009303819.4XP_009302094.1  sperm-associated antigen 17

      UniProtKB/TrEMBL
      A0A8M3AUZ6