si:ch73-71c20.5 si:ch73-71c20.5 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: si:ch73-71c20.5provided by ZNC
Official Full Name: si:ch73-71c20.5provided by ZNC
Primary source: ZFIN:ZDB-GENE-060810-58
See related: Ensembl:ENSDARG00000097696 AllianceGenome:ZFIN:ZDB-GENE-060810-58
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: im:7155681
Summary: Predicted to enable hydroxyacylglutathione hydrolase activity. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

See si:ch73-71c20.5 in Genome Data Viewer

Location:: chromosome: 6

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	6	NC_007117.7 (12986853..12993505)
105	previous assembly	GRCz10 (GCF_000002035.5)	6	NC_007117.6 (12751995..12758836)

Chromosome 6 - NC_007117.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fc50f07 (e-PCR)
- UniSTS:189273

fc26f09.x1 (e-PCR)
- UniSTS:187869

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables hydroxyacylglutathione hydrolase activity	IEA Inferred from Electronic Annotation more info
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: DUF4748 domain-containing protein

NP_001313494.1

EC 3.1.2.6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001326565.1 → NP_001313494.1 DUF4748 domain-containing protein

Status: VALIDATED

Source sequence(s)

CU639421, EH513696, EH545780

UniProtKB/TrEMBL

A0A8M1P8T7, X1WDA0

Related

ENSDARP00000128197.1, ENSDART00000155052.2

Conserved Domains (1) summary

pfam15932
Location:108 → 158

DUF4748; Domain of unknown function (DUF4748)