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    tmem177 transmembrane protein 177 [ Danio rerio (zebrafish) ]

    Gene ID: 556875, updated on 9-Dec-2024

    Summary

    Official Symbol
    tmem177provided by ZNC
    Official Full Name
    transmembrane protein 177provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-993
    See related
    Ensembl:ENSDARG00000069301 AllianceGenome:ZFIN:ZDB-GENE-030131-993
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fb55d01; zgc:73384; wu:fb55d01
    Summary
    Predicted to be located in mitochondrial inner membrane. Predicted to be active in membrane. Orthologous to human TMEM177 (transmembrane protein 177). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See tmem177 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (29034221..29039470, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (29223475..29228724, complement)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137490688 Neighboring gene erythrocyte membrane protein band 4.1 like 5 Neighboring gene protein tyrosine phosphatase non-receptor type 4a Neighboring gene muscle RAS oncogene homolog a Neighboring gene parathyroid hormone 2 receptor a Neighboring gene uncharacterized LOC137496477

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC73384

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial inner membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199594.1NP_955888.1  transmembrane protein 177

      See identical proteins and their annotated locations for NP_955888.1

      Status: PROVISIONAL

      Source sequence(s)
      BC059692
      UniProtKB/Swiss-Prot
      Q6PBI8
      Related
      ENSDARP00000091517.3, ENSDART00000100744.4

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      29034221..29039470 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395284.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      303839..309114 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)