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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001317996.2 → NP_001304925.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks a segment in the 3' UTR compared to variant 1. Variants 1, 2 and 4 encode the same isoform (a).
- Source sequence(s)
-
AP000553
- Consensus CDS
-
CCDS13793.1
- UniProtKB/Swiss-Prot
- Q13356, Q13357, Q8TAH2, Q9BWR8
- UniProtKB/TrEMBL
-
A8K0I0
- Related
- ENSP00000506144.1, ENST00000679795.1
- Conserved Domains (4) summary
-
- cd01923
Location:281 → 440
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...
- cd00162
Location:103 → 146
- RING_Ubox; U-box domain, a modified RING finger [structural motif]
- cd16663
Location:38 → 110
- RING-Ubox_PPIL2; U-box domain, a modified RING finger, found in peptidyl-prolyl cis-trans isomerase-like 2 (PPIL2) and similar proteins
- cl17238
Location:100 → 159
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
NM_014337.4 → NP_055152.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform a
See identical proteins and their annotated locations for NP_055152.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2 and 4 encode the same isoform (a).
- Source sequence(s)
-
AP000553
- Consensus CDS
-
CCDS13793.1
- UniProtKB/Swiss-Prot
- Q13356, Q13357, Q8TAH2, Q9BWR8
- UniProtKB/TrEMBL
-
A8K0I0
- Related
- ENSP00000381812.3, ENST00000398831.8
- Conserved Domains (4) summary
-
- cd01923
Location:281 → 440
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...
- cd00162
Location:103 → 146
- RING_Ubox; U-box domain, a modified RING finger [structural motif]
- cd16663
Location:38 → 110
- RING-Ubox_PPIL2; U-box domain, a modified RING finger, found in peptidyl-prolyl cis-trans isomerase-like 2 (PPIL2) and similar proteins
- cl17238
Location:100 → 159
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
NM_148175.3 → NP_680480.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform a
See identical proteins and their annotated locations for NP_680480.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks a segment in the 3' UTR compared to variant 1. Variants 1, 2 and 4 encode the same isoform (a).
- Source sequence(s)
-
AA743164, AK127259, AP000553, BC028385, DA863607, U37221
- Consensus CDS
-
CCDS13793.1
- UniProtKB/Swiss-Prot
- Q13356, Q13357, Q8TAH2, Q9BWR8
- UniProtKB/TrEMBL
-
A8K0I0
- Related
- ENSP00000334553.7, ENST00000335025.12
- Conserved Domains (4) summary
-
- cd01923
Location:281 → 440
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...
- cd00162
Location:103 → 146
- RING_Ubox; U-box domain, a modified RING finger [structural motif]
- cd16663
Location:38 → 110
- RING-Ubox_PPIL2; U-box domain, a modified RING finger, found in peptidyl-prolyl cis-trans isomerase-like 2 (PPIL2) and similar proteins
- cl17238
Location:100 → 159
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
NM_148176.3 → NP_680481.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform b
See identical proteins and their annotated locations for NP_680481.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate acceptor splice site in the 3' coding region that results in a frameshift compared to variant 1. The encoded isoform (b) contains a longer and distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AK127259, BC000022, BC028385, DA863607
- Consensus CDS
-
CCDS46670.1
- UniProtKB/TrEMBL
-
A8K0I0
- Related
- ENSP00000486725.1, ENST00000626352.2
- Conserved Domains (3) summary
-
- cd01923
Location:281 → 440
- cyclophilin_RING; cyclophilin_RING: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal ...
- cd16663
Location:38 → 110
- RING-Ubox_PPIL2; U-box domain, a modified RING finger, found in peptidyl-prolyl cis-trans isomerase-like 2 (PPIL2) and similar proteins
- cl17238
Location:100 → 159
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000022.11 Reference GRCh38.p14 Primary Assembly
- Range
-
21666012..21700015
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011530049.3 → XP_011528351.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X5
See identical proteins and their annotated locations for XP_011528351.1
- Conserved Domains (1) summary
-
- cd01923
Location:103 → 262
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...
-
XM_011530046.4 → XP_011528348.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X4
See identical proteins and their annotated locations for XP_011528348.1
- UniProtKB/Swiss-Prot
- Q13356, Q13357, Q8TAH2, Q9BWR8
- UniProtKB/TrEMBL
-
A8K0I0
- Related
- ENSP00000506328.1, ENST00000679540.1
- Conserved Domains (4) summary
-
- cd01923
Location:281 → 440
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...
- cd00162
Location:103 → 146
- RING_Ubox; U-box domain, a modified RING finger [structural motif]
- cd16663
Location:38 → 110
- RING-Ubox_PPIL2; U-box domain, a modified RING finger, found in peptidyl-prolyl cis-trans isomerase-like 2 (PPIL2) and similar proteins
- cl17238
Location:100 → 159
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_047441267.1 → XP_047297223.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X3
- UniProtKB/TrEMBL
-
A0A7P0T8E8
-
XM_011530041.4 → XP_011528343.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1
- UniProtKB/TrEMBL
-
A0A7P0TB19
- Related
- ENSP00000506368.1, ENST00000680094.1
- Conserved Domains (4) summary
-
- cd01923
Location:281 → 440
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...
- cd00162
Location:103 → 146
- RING_Ubox; U-box domain, a modified RING finger [structural motif]
- cd16663
Location:38 → 110
- RING-Ubox_PPIL2; U-box domain, a modified RING finger, found in peptidyl-prolyl cis-trans isomerase-like 2 (PPIL2) and similar proteins
- cl17238
Location:100 → 159
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_011530043.4 → XP_011528345.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X2
- UniProtKB/TrEMBL
-
A0A7P0T8E8
- Conserved Domains (4) summary
-
- cd01923
Location:281 → 440
- cyclophilin_RING; cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human ...
- cd00162
Location:103 → 146
- RING_Ubox; U-box domain, a modified RING finger [structural motif]
- cd16663
Location:38 → 110
- RING-Ubox_PPIL2; U-box domain, a modified RING finger, found in peptidyl-prolyl cis-trans isomerase-like 2 (PPIL2) and similar proteins
- cl17238
Location:100 → 159
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_024452193.2 → XP_024307961.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X6
- UniProtKB/TrEMBL
-
A0A7P0TBL3
- Related
- ENSP00000506723.1, ENST00000679580.1
- Conserved Domains (4) summary
-
- cd00162
Location:103 → 146
- RING_Ubox; U-box domain, a modified RING finger [structural motif]
- cd16663
Location:38 → 110
- RING-Ubox_PPIL2; U-box domain, a modified RING finger, found in peptidyl-prolyl cis-trans isomerase-like 2 (PPIL2) and similar proteins
- cl00197
Location:281 → 401
- cyclophilin; cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug ...
- cl17238
Location:100 → 159
- RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
-
XM_047441268.1 → XP_047297224.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060946.1 Alternate T2T-CHM13v2.0
- Range
-
22079481..22113495
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054325409.1 → XP_054181384.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X5
-
XM_054325408.1 → XP_054181383.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X4
- UniProtKB/Swiss-Prot
- Q13356, Q13357, Q8TAH2, Q9BWR8
- UniProtKB/TrEMBL
-
A8K0I0
-
XM_054325407.1 → XP_054181382.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X3
- UniProtKB/TrEMBL
-
A0A7P0T8E8
-
XM_054325405.1 → XP_054181380.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1
- UniProtKB/TrEMBL
-
A0A7P0TB19
-
XM_054325406.1 → XP_054181381.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X2
- UniProtKB/TrEMBL
-
A0A7P0T8E8
-
XM_054325411.1 → XP_054181386.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X6
- UniProtKB/TrEMBL
-
A0A7P0TBL3
-
XM_054325410.1 → XP_054181385.1 RING-type E3 ubiquitin-protein ligase PPIL2 isoform X5