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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001260504.2 → NP_001247433.1 serine/threonine-protein kinase 31 isoform b
See identical proteins and their annotated locations for NP_001247433.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and coding region, and initiates translation at a downstream AUG compared to variant 1. The resulting protein (isoform b) has a shorter N-terminus compared to isoform 1. Variants 2 and 4 encode the same protein.
- Source sequence(s)
-
AA315045, AC003087, AC008176, AF332194, AK131214, DA533364
- Consensus CDS
-
CCDS43556.1
- UniProtKB/TrEMBL
- A0A140VKG1, A4D160
- Related
- ENSP00000346660.3, ENST00000354639.7
- Conserved Domains (2) summary
-
- cd20430
Location:38 → 112
- Tudor_TDRD8; Tudor domain found in Tudor domain-containing protein 8 (TDRD8) and similar proteins
- cl21453
Location:805 → 945
- PKc_like; Protein Kinases, catalytic domain
-
NM_001260505.2 → NP_001247434.1 serine/threonine-protein kinase 31 isoform c
See identical proteins and their annotated locations for NP_001247434.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an alternate in-frame exon in the 3' coding region compared to variant 1. The resulting protein (isoform c) is shorter and has a distinct N-terminus compared to isoform a.
- Source sequence(s)
-
AC003087, AC008176, AK302689
- Consensus CDS
-
CCDS59049.1
- UniProtKB/TrEMBL
-
A4D159
- Related
- ENSP00000411852.2, ENST00000433467.6
- Conserved Domains (3) summary
-
- cd04508
Location:89 → 129
- TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
- pfam00567
Location:29 → 147
- TUDOR; Tudor domain
- cl21453
Location:802 → 986
- PKc_like; Protein Kinases, catalytic domain
-
NM_031414.5 → NP_113602.2 serine/threonine-protein kinase 31 isoform a
See identical proteins and their annotated locations for NP_113602.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
AC003087, BC059374, DB065148
- Consensus CDS
-
CCDS5386.1
- UniProtKB/Swiss-Prot
- B4DZ06, B7WPP5, C9J4F9, Q6PCD3, Q9BXH8, Q9BXU1
- UniProtKB/TrEMBL
-
A4D159
- Related
- ENSP00000348132.3, ENST00000355870.8
- Conserved Domains (3) summary
-
- cd04508
Location:89 → 129
- TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
- pfam00567
Location:29 → 147
- TUDOR; Tudor domain
- cl21453
Location:802 → 921
- PKc_like; Protein Kinases, catalytic domain
-
NM_032944.4 → NP_116562.2 serine/threonine-protein kinase 31 isoform b
See identical proteins and their annotated locations for NP_116562.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice-site in the 5' end that results in translation initiation at a downstream start codon, compared to variant 1. The encoded protein (isoform b) has a shorter N-terminus, compared to isoform a.
- Source sequence(s)
-
AC003087, AC008176, BC059374, DB095141
- Consensus CDS
-
CCDS43556.1
- UniProtKB/TrEMBL
- A0A140VKG1, A4D160
- Conserved Domains (2) summary
-
- cd20430
Location:38 → 112
- Tudor_TDRD8; Tudor domain found in Tudor domain-containing protein 8 (TDRD8) and similar proteins
- cl21453
Location:805 → 945
- PKc_like; Protein Kinases, catalytic domain
RNA
-
NR_048542.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in a 5' exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA315045, AC003087, AC008176, AK131214, BC033018, DB089624
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
23710082..23832513
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011515452.4 → XP_011513754.2 serine/threonine-protein kinase 31 isoform X3
- UniProtKB/TrEMBL
-
A4D160
-
XM_011515449.4 → XP_011513751.2 serine/threonine-protein kinase 31 isoform X1
- UniProtKB/TrEMBL
-
A4D160
- Related
- ENSP00000519677.1, ENST00000528479.6
-
XM_006715758.5 → XP_006715821.1 serine/threonine-protein kinase 31 isoform X4
- UniProtKB/TrEMBL
-
A4D159
- Conserved Domains (3) summary
-
- cd04508
Location:89 → 129
- TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
- pfam00567
Location:29 → 147
- TUDOR; Tudor domain
- cl21453
Location:624 → 743
- PKc_like; Protein Kinases, catalytic domain
-
XM_011515450.2 → XP_011513752.1 serine/threonine-protein kinase 31 isoform X2
See identical proteins and their annotated locations for XP_011513752.1
- UniProtKB/TrEMBL
- A0A140VKG1, A4D160
- Conserved Domains (2) summary
-
- cd20430
Location:38 → 112
- Tudor_TDRD8; Tudor domain found in Tudor domain-containing protein 8 (TDRD8) and similar proteins
- cl21453
Location:805 → 945
- PKc_like; Protein Kinases, catalytic domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
23849359..23971746
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054358654.1 → XP_054214629.1 serine/threonine-protein kinase 31 isoform X3
- UniProtKB/TrEMBL
-
A4D160
-
XM_054358652.1 → XP_054214627.1 serine/threonine-protein kinase 31 isoform X1
- UniProtKB/TrEMBL
-
A4D160
-
XM_054358655.1 → XP_054214630.1 serine/threonine-protein kinase 31 isoform X4
- UniProtKB/TrEMBL
-
A4D159
-
XM_054358653.1 → XP_054214628.1 serine/threonine-protein kinase 31 isoform X2
- UniProtKB/TrEMBL
- A0A140VKG1, A4D160
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001122833.1: Suppressed sequence
- Description
- NM_001122833.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.