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    gucd1 guanylyl cyclase domain containing 1 [ Danio rerio (zebrafish) ]

    Gene ID: 564677, updated on 9-Dec-2024

    Summary

    Official Symbol
    gucd1provided by ZNC
    Official Full Name
    guanylyl cyclase domain containing 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060929-872
    See related
    Ensembl:ENSDARG00000068438 AllianceGenome:ZFIN:ZDB-GENE-060929-872
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fi27d12; zgc:152874
    Summary
    Orthologous to human GUCD1 (guanylyl cyclase domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See gucd1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (30730594..30742233, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (30721362..30733001, complement)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene adenosine A2a receptor a Neighboring gene chromosome 8 C22orf15 homolog Neighboring gene ureidopropionase, beta Neighboring gene small nuclear ribonucleoprotein D3 polypeptide Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 4b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077162.2NP_001070630.1  protein GUCD1

      See identical proteins and their annotated locations for NP_001070630.1

      Status: VALIDATED

      Source sequence(s)
      CR848681, EH538861, EH546653
      UniProtKB/TrEMBL
      A0A8M1NBL3, Q08CN7
      Related
      ENSDARP00000089757.3, ENSDART00000098986.4
      Conserved Domains (1) summary
      pfam09778
      Location:9222
      Guanylate_cyc_2; Guanylylate cyclase

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      30730594..30742233 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394731.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      328442..340081 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)