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    actr6 actin related protein 6 [ Danio rerio (zebrafish) ]

    Gene ID: 324822, updated on 2-Nov-2024

    Summary

    Official Symbol
    actr6provided by ZNC
    Official Full Name
    actin related protein 6provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-3543
    See related
    Ensembl:ENSDARG00000021370 AllianceGenome:ZFIN:ZDB-GENE-030131-3543
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:56166; wu:fc44c08
    Summary
    Predicted to enable nucleosome binding activity. Predicted to be part of Swr1 complex. Orthologous to human ACTR6 (actin related protein 6). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See actr6 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (19585318..19594063, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (19487367..19496112, complement)

    Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene si:ch211-59o9.10 Neighboring gene LYR motif containing 5b Neighboring gene synaptonemal complex protein 3 Neighboring gene G-2 and S-phase expressed 1 Neighboring gene ATPase plasma membrane Ca2+ transporting 1b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables nucleosome binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of Swr1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    actin-related protein 6
    Names
    ARP6 actin related protein 6 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199696.1NP_955990.1  actin-related protein 6

      See identical proteins and their annotated locations for NP_955990.1

      Status: PROVISIONAL

      Source sequence(s)
      BC045961
      UniProtKB/TrEMBL
      Q7ZV86
      Related
      ENSDARP00000005947.7, ENSDART00000003715.9
      Conserved Domains (2) summary
      smart00268
      Location:2394
      ACTIN; Actin
      COG5277
      Location:2393
      COG5277; Actin-related protein [Cytoskeleton]

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007136.7 Reference GRCz11 Primary Assembly

      Range
      19585318..19594063 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)