rimoc1 rab7a interacting mon1-ccz1 complex subunit 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rimoc1provided by ZNC
Official Full Name: rab7a interacting mon1-ccz1 complex subunit 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-4610
See related: Ensembl:ENSDARG00000054777 AllianceGenome:ZFIN:ZDB-GENE-030131-4610
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fd42g01; wu:fd42g01; si:dkey-46a10.3
Summary: Predicted to be involved in mitophagy. Predicted to act upstream of or within autophagy. Predicted to be located in cytosol. Orthologous to human RIMOC1 (RAB7A interacting MON1-CCZ1 complex subunit 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 8

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	8	NC_007119.7 (31704525..31716302, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	8	NC_007119.6 (31695293..31707070, complement)

Chromosome 8 - NC_007119.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within autophagy	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within mitophagy	IEA Inferred from Electronic Annotation more info
involved_in mitophagy	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytosol	ISS Inferred from Sequence or Structural Similarity more info

General protein information

Go to the top of the page Help

Preferred Names: RAB7A-interacting MON1-CCZ1 complex subunit 1

Names: UPF0600 protein C5orf51 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.