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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001076788.2 → NP_001070256.1 zinc finger CCCH domain-containing protein 13 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1), as well as variants 2 and 7-9, encodes isoform 1.
- Source sequence(s)
-
AB020660, AI640521, AK074924, AL445232, AY283618, BC032425, CN262326
- Consensus CDS
-
CCDS91804.1
- UniProtKB/TrEMBL
-
A0A7I2V4I5
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
NM_001330564.2 → NP_001317493.1 zinc finger CCCH domain-containing protein 13 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2), as well as variants 1 and 7-9, encodes isoform 1.
- Source sequence(s)
-
AB020660, AI640521, AK074924, AL445232, AY283618, BC032425, CN262326, CN262335, DA498537
- Consensus CDS
-
CCDS91804.1
- UniProtKB/TrEMBL
-
A0A7I2V4I5
- Related
- ENSP00000503994.1, ENST00000679008.1
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
NM_001330565.2 → NP_001317494.1 zinc finger CCCH domain-containing protein 13 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3), as well as variants 4, 5, 10, and 11, encodes isoform 2.
- Source sequence(s)
-
AB020660, AI640521, AK074924, AL445232, AY283618, BC032425, CN262326, DA249612
- Consensus CDS
-
CCDS81766.1
- UniProtKB/Swiss-Prot
- A2A323, O94936, Q5T1Z9, Q5T200, Q7Z7J3, Q8NDT6, Q9H0L6
-
NM_001330566.2 → NP_001317495.1 zinc finger CCCH domain-containing protein 13 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (4), as well as variants 3, 5, 10, and 11, encodes isoform 2.
- Source sequence(s)
-
AB020660, AI640521, AK074924, AL445232, AY283618, BC032425, CN262326, DA475846, DA498537
- Consensus CDS
-
CCDS81766.1
- UniProtKB/Swiss-Prot
- A2A323, O94936, Q5T1Z9, Q5T200, Q7Z7J3, Q8NDT6, Q9H0L6
-
NM_001330567.2 → NP_001317496.1 zinc finger CCCH domain-containing protein 13 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (5), as well as variants 3, 4, 10, and 11, encodes isoform 2.
- Source sequence(s)
-
AB020660, AI640521, AK074924, AL445232, AY283618, BC032425, CN262326, DA498537
- Consensus CDS
-
CCDS81766.1
- UniProtKB/Swiss-Prot
- A2A323, O94936, Q5T1Z9, Q5T200, Q7Z7J3, Q8NDT6, Q9H0L6
-
NM_001382206.1 → NP_001369135.1 zinc finger CCCH domain-containing protein 13 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (7), as well as variants 1, 2, 8, and 9, encodes isoform 1.
- Source sequence(s)
-
AL157758, AL445232
- Consensus CDS
-
CCDS91804.1
- UniProtKB/TrEMBL
-
A0A7I2V4I5
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
NM_001382207.1 → NP_001369136.1 zinc finger CCCH domain-containing protein 13 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (8), as well as variants 1, 2, 7, and 9, encodes isoform 1.
- Source sequence(s)
-
AL157758, AL445232
- Consensus CDS
-
CCDS91804.1
- UniProtKB/TrEMBL
-
A0A7I2V4I5
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
NM_001382208.1 → NP_001369137.1 zinc finger CCCH domain-containing protein 13 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (9), as well as variants 1, 2, 7, and 8, encodes isoform 1.
- Source sequence(s)
-
AL157758, AL445232
- Consensus CDS
-
CCDS91804.1
- UniProtKB/TrEMBL
-
A0A7I2V4I5
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
NM_001382209.1 → NP_001369138.1 zinc finger CCCH domain-containing protein 13 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (10), as well as variants 3, 4, 5, and 11, encodes isoform 2.
- Source sequence(s)
-
AL157758, AL445232
- Consensus CDS
-
CCDS81766.1
- UniProtKB/Swiss-Prot
- A2A323, O94936, Q5T1Z9, Q5T200, Q7Z7J3, Q8NDT6, Q9H0L6
-
NM_001382210.1 → NP_001369139.1 zinc finger CCCH domain-containing protein 13 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (11), as well as variants 3, 4, 5, and 10, encodes isoform 2.
- Source sequence(s)
-
AL157758, AL445232
- Consensus CDS
-
CCDS81766.1
- UniProtKB/Swiss-Prot
- A2A323, O94936, Q5T1Z9, Q5T200, Q7Z7J3, Q8NDT6, Q9H0L6
- Related
- ENSP00000242848.4, ENST00000242848.8
-
NM_001382211.1 → NP_001369140.1 zinc finger CCCH domain-containing protein 13 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (12) encodes the longest isoform (4).
- Source sequence(s)
-
AL157758, AL445232
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
NM_001382212.1 → NP_001369141.1 zinc finger CCCH domain-containing protein 13 isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (13), as well as variant 14, encodes isoform 5.
- Source sequence(s)
-
AL157758, AL445232
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
NM_001382213.1 → NP_001369142.1 zinc finger CCCH domain-containing protein 13 isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (14), as well as variant 13, encodes isoform 5.
- Source sequence(s)
-
AL157758, AL445232
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
NM_001382214.1 → NP_001369143.1 zinc finger CCCH domain-containing protein 13 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AL157758, AL445232
- Conserved Domains (1) summary
-
- PRK12678
Location:176 → 399
- PRK12678; transcription termination factor Rho; Provisional
-
NM_015070.6 → NP_055885.3 zinc finger CCCH domain-containing protein 13 isoform 3
See identical proteins and their annotated locations for NP_055885.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks several exons and its 3' terminal exon extends past a splice site that is used in variant 1. This results in a novel 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (3) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AL445232, AY283618, BC032425, CN262326
- Consensus CDS
-
CCDS9400.1
- UniProtKB/Swiss-Prot
-
Q5T200
- UniProtKB/TrEMBL
-
A0PJJ2
- Related
- ENSP00000282007.3, ENST00000282007.7
- Conserved Domains (1) summary
-
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
RNA
-
NR_167893.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL157758, AL445232
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000013.11 Reference GRCh38.p14 Primary Assembly
- Range
-
45954465..46052746 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047430207.1 → XP_047286163.1 zinc finger CCCH domain-containing protein 13 isoform X4
- UniProtKB/Swiss-Prot
- A2A323, O94936, Q5T1Z9, Q5T200, Q7Z7J3, Q8NDT6, Q9H0L6
-
XM_005266306.4 → XP_005266363.1 zinc finger CCCH domain-containing protein 13 isoform X1
See identical proteins and their annotated locations for XP_005266363.1
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
XM_005266302.4 → XP_005266359.1 zinc finger CCCH domain-containing protein 13 isoform X1
See identical proteins and their annotated locations for XP_005266359.1
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
XM_047430208.1 → XP_047286164.1 zinc finger CCCH domain-containing protein 13 isoform X4
- UniProtKB/Swiss-Prot
- A2A323, O94936, Q5T1Z9, Q5T200, Q7Z7J3, Q8NDT6, Q9H0L6
-
XM_047430206.1 → XP_047286162.1 zinc finger CCCH domain-containing protein 13 isoform X3
- UniProtKB/TrEMBL
-
A0A7I2V4I5
-
XM_017020476.3 → XP_016875965.1 zinc finger CCCH domain-containing protein 13 isoform X1
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
XM_017020475.3 → XP_016875964.1 zinc finger CCCH domain-containing protein 13 isoform X1
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
XM_047430205.1 → XP_047286161.1 zinc finger CCCH domain-containing protein 13 isoform X2
-
XM_005266304.4 → XP_005266361.1 zinc finger CCCH domain-containing protein 13 isoform X1
See identical proteins and their annotated locations for XP_005266361.1
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
XM_017020478.2 → XP_016875967.1 zinc finger CCCH domain-containing protein 13 isoform X3
- UniProtKB/TrEMBL
-
A0A7I2V4I5
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
XM_005266305.4 → XP_005266362.1 zinc finger CCCH domain-containing protein 13 isoform X1
See identical proteins and their annotated locations for XP_005266362.1
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
-
XM_005266303.4 → XP_005266360.1 zinc finger CCCH domain-containing protein 13 isoform X1
See identical proteins and their annotated locations for XP_005266360.1
- Conserved Domains (2) summary
-
- PRK12678
Location:343 → 566
- PRK12678; transcription termination factor Rho; Provisional
- pfam00642
Location:42 → 63
- zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060937.1 Alternate T2T-CHM13v2.0
- Range
-
45175847..45274136 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054374296.1 → XP_054230271.1 zinc finger CCCH domain-containing protein 13 isoform X4
-
XM_054374289.1 → XP_054230264.1 zinc finger CCCH domain-containing protein 13 isoform X1
-
XM_054374286.1 → XP_054230261.1 zinc finger CCCH domain-containing protein 13 isoform X1
-
XM_054374297.1 → XP_054230272.1 zinc finger CCCH domain-containing protein 13 isoform X4
-
XM_054374295.1 → XP_054230270.1 zinc finger CCCH domain-containing protein 13 isoform X3
-
XM_054374290.1 → XP_054230265.1 zinc finger CCCH domain-containing protein 13 isoform X1
-
XM_054374292.1 → XP_054230267.1 zinc finger CCCH domain-containing protein 13 isoform X1
-
XM_054374293.1 → XP_054230268.1 zinc finger CCCH domain-containing protein 13 isoform X2
-
XM_054374287.1 → XP_054230262.1 zinc finger CCCH domain-containing protein 13 isoform X1
-
XM_054374294.1 → XP_054230269.1 zinc finger CCCH domain-containing protein 13 isoform X3
-
XM_054374288.1 → XP_054230263.1 zinc finger CCCH domain-containing protein 13 isoform X1
-
XM_054374291.1 → XP_054230266.1 zinc finger CCCH domain-containing protein 13 isoform X1