U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Hus1b HUS1 checkpoint clamp component B [ Mus musculus (house mouse) ]

    Gene ID: 210554, updated on 18-Sep-2024

    Summary

    Official Symbol
    Hus1bprovided by MGI
    Official Full Name
    HUS1 checkpoint clamp component Bprovided by MGI
    Primary source
    MGI:MGI:2671003
    See related
    Ensembl:ENSMUSG00000076430 AllianceGenome:MGI:2671003
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to be involved in DNA integrity checkpoint signaling and DNA metabolic process. Predicted to be located in nucleolus. Predicted to be part of checkpoint clamp complex. Predicted to be active in site of double-strand break. Orthologous to human HUS1B (HUS1 checkpoint clamp component B). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Hus1b in Genome Data Viewer
    Location:
    13 A3.2; 13 13.33 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (31130559..31131744, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (30946576..30947761, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E5386 Neighboring gene dual specificity phosphatase 22 Neighboring gene STARR-seq mESC enhancer starr_34069 Neighboring gene STARR-positive B cell enhancer ABC_E10787 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:30853140-30853323 Neighboring gene interferon regulatory factor 4 Neighboring gene exocyst complex component 2 Neighboring gene STARR-positive B cell enhancer ABC_E11781 Neighboring gene predicted gene, 35302 Neighboring gene RIKEN cDNA 4930401O12 gene

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in DNA damage checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in double-strand break repair via homologous recombination IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in meiotic DNA integrity checkpoint signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitotic DNA replication checkpoint signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitotic intra-S DNA damage checkpoint signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in nucleotide-excision repair IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in telomere maintenance IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of checkpoint clamp complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of checkpoint clamp complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in site of double-strand break IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    checkpoint protein HUS1B
    Names
    Hus1 checkpoint homolog b
    Hus1 homolog b

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_153072.2NP_694712.1  checkpoint protein HUS1B

      See identical proteins and their annotated locations for NP_694712.1

      Status: VALIDATED

      Source sequence(s)
      AL606764
      Consensus CDS
      CCDS26421.1
      UniProtKB/Swiss-Prot
      Q8K572
      UniProtKB/TrEMBL
      Q059L7
      Related
      ENSMUSP00000100007.2, ENSMUST00000102943.2
      Conserved Domains (1) summary
      pfam04005
      Location:1276
      Hus1; Hus1-like protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      31130559..31131744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)