NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001170978.1 → NP_001164449.1 4-aminobutyrate aminotransferase, mitochondrial isoform 2 precursor
See identical proteins and their annotated locations for NP_001164449.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the central coding region, compared to variant 1. The encoded protein, isoform 2, is shorter compared to isoform 1.
- Source sequence(s)
-
AK036128, BC058521, CX237932
- Consensus CDS
-
CCDS49754.1
- UniProtKB/TrEMBL
-
Q3V1S0
- Related
- ENSMUSP00000111505.3, ENSMUST00000115839.9
- Conserved Domains (2) summary
-
- COG0160
Location:42 → 442
- GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
- cl18945
Location:34 → 440
- AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
-
NM_172961.3 → NP_766549.2 4-aminobutyrate aminotransferase, mitochondrial isoform 1 precursor
See identical proteins and their annotated locations for NP_766549.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
BC058521, CX237932
- Consensus CDS
-
CCDS27939.1
- UniProtKB/Swiss-Prot
- P61922, Q8BZA3
- UniProtKB/TrEMBL
-
Q3V1S0
- Related
- ENSMUSP00000063548.8, ENSMUST00000065987.14
- Conserved Domains (2) summary
-
- TIGR00699
Location:34 → 496
- GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type
- COG0160
Location:42 → 498
- GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000082.7 Reference GRCm39 C57BL/6J
- Range
-
8331293..8439432
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)