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    DPRXP4 divergent-paired related homeobox pseudogene 4 [ Homo sapiens (human) ]

    Gene ID: 503645, updated on 17-Sep-2024

    Summary

    Official Symbol
    DPRXP4provided by HGNC
    Official Full Name
    divergent-paired related homeobox pseudogene 4provided by HGNC
    Primary source
    HGNC:HGNC:32170
    See related
    Ensembl:ENSG00000264743 AllianceGenome:HGNC:32170
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the DPRX homeobox gene family. [provided by RefSeq, Jul 2008]
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    Genomic context

    See DPRXP4 in Genome Data Viewer
    Location:
    17q11.2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (30975335..30976004)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (31921039..31921708)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (29302353..29303022)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8402 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8403 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8404 Neighboring gene MPRA-validated peak2796 silencer Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12003 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:29284865-29285364 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8405 Neighboring gene RNA, 7SL, cytoplasmic 138, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12005 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12004 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:29297471-29298032 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:29298033-29298594 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12007 Neighboring gene ring finger protein 135 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:29335291-29335792 Neighboring gene SMAD specific E3 ubiquitin protein ligase 2 (SMURF2) pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8407 Neighboring gene leucine rich repeat containing 37B pseudogene Neighboring gene NF1-REPb PRS3 recombination region Neighboring gene uncharacterized LOC124903974 Neighboring gene MIR4733 host gene

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002221.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC138207
      Related
      ENST00000578053.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      30975335..30976004
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791803.1 Reference GRCh38.p14 PATCHES

      Range
      54509..55178
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      31921039..31921708
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)