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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001042583.3 → NP_001036048.1 T-cell surface glycoprotein CD1e, membrane-associated isoform b precursor
See identical proteins and their annotated locations for NP_001036048.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform b, also known as 2).
- Source sequence(s)
-
AJ289112, AL121986, BC131693, DC406237
- Consensus CDS
-
CCDS41418.1
- UniProtKB/TrEMBL
-
A2RRL5
- Related
- ENSP00000357142.3, ENST00000368160.7
- Conserved Domains (2) summary
-
- cd07698
Location:209 → 301
- IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain
- cl08246
Location:30 → 204
- MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
-
NM_001042584.3 → NP_001036049.1 T-cell surface glycoprotein CD1e, membrane-associated isoform c precursor
See identical proteins and their annotated locations for NP_001036049.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 3' coding region, compared to variant 1, that results in a frameshift. It encodes an isoform (c, also known as 3), which has a shorter and distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AJ289113, AL121986, BC131693, DC406237
- Consensus CDS
-
CCDS41421.1
- UniProtKB/TrEMBL
-
A2RRL5
- Related
- ENSP00000357143.3, ENST00000368161.7
- Conserved Domains (2) summary
-
- cl08246
Location:30 → 204
- MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
- cl11960
Location:209 → 269
- Ig; Immunoglobulin domain
-
NM_001042585.3 → NP_001036050.1 T-cell surface glycoprotein CD1e, membrane-associated isoform d precursor
See identical proteins and their annotated locations for NP_001036050.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses two alternate in-frame splice sites in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform d, also known as 4), compared to isoform a.
- Source sequence(s)
-
AJ289114, AL121986, BC131693, DC406237
- Consensus CDS
-
CCDS41419.1
- UniProtKB/TrEMBL
-
A2RRL5
- Related
- ENSP00000357145.3, ENST00000368163.7
- Conserved Domains (2) summary
-
- cl08246
Location:30 → 204
- MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
- cl11960
Location:209 → 248
- Ig; Immunoglobulin domain
-
NM_001042586.3 → NP_001036051.1 T-cell surface glycoprotein CD1e, membrane-associated isoform e precursor
See identical proteins and their annotated locations for NP_001036051.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) is missing two coding exons and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform e, also known as 9) compared to isoform a.
- Source sequence(s)
-
AJ289119, AL121986, DC406237
- Consensus CDS
-
CCDS41420.1
- UniProtKB/Swiss-Prot
-
P15812
- Related
- ENSP00000357148.3, ENST00000368166.7
- Conserved Domains (1) summary
-
- cd07698
Location:20 → 112
- IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain
-
NM_001042587.3 → NP_001036052.1 T-cell surface glycoprotein CD1e, membrane-associated isoform f precursor
See identical proteins and their annotated locations for NP_001036052.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) is missing two coding exons and uses an alternate splice site in the 3' coding region, which results in a translational frameshift, compared to variant 1. It encodes a protein (isoform f, also known as 10) that is shorter and has a distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AJ289120, AL121986, DC406237
- Consensus CDS
-
CCDS41422.1
- UniProtKB/Swiss-Prot
-
P15812
- Related
- ENSP00000357146.3, ENST00000368164.7
- Conserved Domains (1) summary
-
- cl11960
Location:20 → 80
- Ig; Immunoglobulin domain
-
NM_001185107.2 → NP_001172036.1 T-cell surface glycoprotein CD1e, membrane-associated isoform g precursor
See identical proteins and their annotated locations for NP_001172036.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) is missing a coding exon, compared to variant 1. It encodes a protein (isoform g, also known as 5) that is shorter when it is compared to isoform a.
- Source sequence(s)
-
AJ289115, AL121986, BC131693, DC406237
- Consensus CDS
-
CCDS53385.1
- UniProtKB/Swiss-Prot
-
P15812
- UniProtKB/TrEMBL
-
A2RRL5
- Related
- ENSP00000357147.3, ENST00000368165.7
- Conserved Domains (2) summary
-
- cd07698
Location:120 → 211
- IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain
- cl08246
Location:30 → 142
- MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
-
NM_001185108.2 → NP_001172037.1 T-cell surface glycoprotein CD1e, membrane-associated isoform i precursor
See identical proteins and their annotated locations for NP_001172037.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) is missing a coding exon and uses two alternate in-frame splice sites in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform i, also known as 7), compared to isoform a.
- Source sequence(s)
-
AJ289117, AL121986, BC131693, DC406237
- Consensus CDS
-
CCDS53384.1
- UniProtKB/Swiss-Prot
-
P15812
- UniProtKB/TrEMBL
-
A2RRL5
- Related
- ENSP00000357137.3, ENST00000368155.7
- Conserved Domains (2) summary
-
- cl08246
Location:30 → 142
- MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
- cl11960
Location:137 → 158
- Ig; Immunoglobulin domain
-
NM_001185110.2 → NP_001172039.1 T-cell surface glycoprotein CD1e, membrane-associated isoform l precursor
See identical proteins and their annotated locations for NP_001172039.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (12) is missing two coding exons and uses two alternate in-frame splice sites in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform l, also known as 12), compared to isoform a.
- Source sequence(s)
-
AJ289122, AL121986, DC406237
- Consensus CDS
-
CCDS53389.1
- UniProtKB/Swiss-Prot
-
P15812
- Related
- ENSP00000357139.1, ENST00000368157.5
- Conserved Domains (1) summary
-
- cl11960
Location:20 → 59
- Ig; Immunoglobulin domain
-
NM_001185112.2 → NP_001172041.1 T-cell surface glycoprotein CD1e, membrane-associated isoform j precursor
See identical proteins and their annotated locations for NP_001172041.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) is missing two coding exons, compared to variant 1, resulting in a shorter protein (isoform j, also known as 10), compared to isoform a.
- Source sequence(s)
-
AJ289118, AL121986, DC406237
- Consensus CDS
-
CCDS53390.1
- UniProtKB/Swiss-Prot
-
P15812
- Related
- ENSP00000416228.2, ENST00000452291.6
- Conserved Domains (1) summary
-
- cd07698
Location:20 → 112
- IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain
-
NM_001185113.2 → NP_001172042.1 T-cell surface glycoprotein CD1e, membrane-associated isoform k precursor
See identical proteins and their annotated locations for NP_001172042.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (11) is missing two coding exons and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform k, also known as 11), compared to isoform a.
- Source sequence(s)
-
AJ289121, AL121986, DC406237
- Consensus CDS
-
CCDS53388.1
- UniProtKB/Swiss-Prot
-
P15812
- Related
- ENSP00000357136.1, ENST00000368154.5
- Conserved Domains (1) summary
-
- cl11960
Location:20 → 59
- Ig; Immunoglobulin domain
-
NM_001185114.2 → NP_001172043.1 T-cell surface glycoprotein CD1e, membrane-associated isoform m precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (13) is missing one coding exon and uses two alternate in-frame splice sites in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform m), compared to isoform a.
- Source sequence(s)
-
AK311643, AL121986
- Consensus CDS
-
CCDS53387.1
- UniProtKB/Swiss-Prot
-
P15812
- Related
- ENSP00000402906.2, ENST00000444681.6
- Conserved Domains (2) summary
-
- cd07698
Location:110 → 202
- IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain
- cl08246
Location:21 → 105
- MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
-
NM_001185115.2 → NP_001172044.1 T-cell surface glycoprotein CD1e, membrane-associated isoform h precursor
See identical proteins and their annotated locations for NP_001172044.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) is missing a coding exon and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform h, also known as 6), compared to isoform a.
- Source sequence(s)
-
AJ289116, AL121986, BC131693, DC406237
- Consensus CDS
-
CCDS53386.1
- UniProtKB/Swiss-Prot
-
P15812
- UniProtKB/TrEMBL
-
A2RRL5
- Related
- ENSP00000357138.1, ENST00000368156.5
- Conserved Domains (2) summary
-
- cd07698
Location:120 → 211
- IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain
- cl08246
Location:30 → 142
- MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
-
NM_030893.4 → NP_112155.2 T-cell surface glycoprotein CD1e, membrane-associated isoform a precursor
See identical proteins and their annotated locations for NP_112155.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest protein (isoform a, also known as 1).
- Source sequence(s)
-
AJ289111, AL121986, BC131693, DC406237
- Consensus CDS
-
CCDS41417.1
- UniProtKB/Swiss-Prot
- B4DZV3, E7EP01, P15812, Q5TDJ9, Q5TDK3, Q5TDK4, Q5TDK5, Q5TDK6, Q5TDK8, Q5TDL1, Q712E4, Q712E5, Q712E6, Q712E7, Q712E8, Q712E9, Q712F0, Q712F1, Q712F2, Q712F3, Q712F4, Q712F5, Q96TD0, Q96TD1, Q9UMM1, Q9Y5M3
- UniProtKB/TrEMBL
-
A2RRL5
- Related
- ENSP00000357149.3, ENST00000368167.8
- Conserved Domains (2) summary
-
- cd07698
Location:209 → 301
- IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain
- cl08246
Location:30 → 204
- MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
158353894..158357553
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011510133.4 → XP_011508435.1 T-cell surface glycoprotein CD1e, membrane-associated isoform X1
- UniProtKB/TrEMBL
-
A2RRL5
- Conserved Domains (2) summary
-
- cl08246
Location:30 → 204
- MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2
- cl11960
Location:209 → 248
- Ig; Immunoglobulin domain
-
XM_047434051.1 → XP_047290007.1 T-cell surface glycoprotein CD1e, membrane-associated isoform X3
-
XM_047434050.1 → XP_047290006.1 T-cell surface glycoprotein CD1e, membrane-associated isoform X2
-
XM_047434054.1 → XP_047290010.1 T-cell surface glycoprotein CD1e, membrane-associated isoform X4
-
XM_047434055.1 → XP_047290011.1 T-cell surface glycoprotein CD1e, membrane-associated isoform X5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
157490987..157494646
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054339566.1 → XP_054195541.1 T-cell surface glycoprotein CD1e, membrane-associated isoform X1
- UniProtKB/TrEMBL
-
A2RRL5
-
XM_054339568.1 → XP_054195543.1 T-cell surface glycoprotein CD1e, membrane-associated isoform X3
-
XM_054339567.1 → XP_054195542.1 T-cell surface glycoprotein CD1e, membrane-associated isoform X2
-
XM_054339569.1 → XP_054195544.1 T-cell surface glycoprotein CD1e, membrane-associated isoform X4
-
XM_054339570.1 → XP_054195545.1 T-cell surface glycoprotein CD1e, membrane-associated isoform X5