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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001146343.2 → NP_001139815.1 solute carrier family 66 member 2 isoform 2
See identical proteins and their annotated locations for NP_001139815.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks two exons in the coding region, which results in a frameshift and an early stop codon compared to variant 1. The encoded isoform (2) is shorter compared to isoform 1.
- Source sequence(s)
-
AC114341, AK026031, AK301881
- Consensus CDS
-
CCDS54192.1
- UniProtKB/TrEMBL
-
B7Z8S3
- Related
- ENSP00000465546.1, ENST00000590381.5
- Conserved Domains (1) summary
-
- pfam04193
Location:17 → 77
- PQ-loop; PQ loop repeat
-
NM_001146345.2 → NP_001139817.1 solute carrier family 66 member 2 isoform 3
See identical proteins and their annotated locations for NP_001139817.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an in-frame exon in the coding region, compared to variant 1. The encoded isoform (3) is shorter compared to isoform 1.
- Source sequence(s)
-
AC114341, AK026031, DB475520
- Consensus CDS
-
CCDS54193.1
- UniProtKB/Swiss-Prot
-
Q8N2U9
- Related
- ENSP00000350188.3, ENST00000357575.8
- Conserved Domains (1) summary
-
- pfam04193
Location:152 → 212
- PQ-loop; PQ loop repeat
-
NM_025078.5 → NP_079354.2 solute carrier family 66 member 2 isoform 1
See identical proteins and their annotated locations for NP_079354.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC114341, AK026031, BC030140, DB475520
- Consensus CDS
-
CCDS12020.1
- UniProtKB/Swiss-Prot
- B7Z7D9, G5E989, Q8N2U9, Q9H6D0
- Related
- ENSP00000380880.2, ENST00000397778.7
- Conserved Domains (1) summary
-
- pfam04193
Location:170 → 230
- PQ-loop; PQ loop repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000018.10 Reference GRCh38.p14 Primary Assembly
- Range
-
79902420..79951653 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047437837.1 → XP_047293793.1 solute carrier family 66 member 2 isoform X15
- UniProtKB/TrEMBL
-
B7Z8S3
-
XM_047437831.1 → XP_047293787.1 solute carrier family 66 member 2 isoform X4
-
XM_047437835.1 → XP_047293791.1 solute carrier family 66 member 2 isoform X13
-
XM_047437830.1 → XP_047293786.1 solute carrier family 66 member 2 isoform X3
- UniProtKB/Swiss-Prot
- B7Z7D9, G5E989, Q8N2U9, Q9H6D0
-
XM_047437828.1 → XP_047293784.1 solute carrier family 66 member 2 isoform X1
-
XM_047437834.1 → XP_047293790.1 solute carrier family 66 member 2 isoform X11
-
XM_047437829.1 → XP_047293785.1 solute carrier family 66 member 2 isoform X2
-
XM_017026003.2 → XP_016881492.1 solute carrier family 66 member 2 isoform X9
- Conserved Domains (1) summary
-
- pfam04193
Location:17 → 68
- PQ-loop; PQ loop repeat
-
XM_024451267.1 → XP_024307035.1 solute carrier family 66 member 2 isoform X8
- UniProtKB/TrEMBL
-
B3KW14
- Conserved Domains (1) summary
-
- pfam04193
Location:87 → 147
- PQ-loop; PQ loop repeat
-
XM_011526188.1 → XP_011524490.1 solute carrier family 66 member 2 isoform X12
See identical proteins and their annotated locations for XP_011524490.1
- Conserved Domains (1) summary
-
- pfam04193
Location:52 → 112
- PQ-loop; PQ loop repeat
-
XM_017026001.3 → XP_016881490.1 solute carrier family 66 member 2 isoform X7
- Conserved Domains (1) summary
-
- pfam04193
Location:89 → 149
- PQ-loop; PQ loop repeat
-
XM_047437832.1 → XP_047293788.1 solute carrier family 66 member 2 isoform X5
-
XM_017026000.2 → XP_016881489.1 solute carrier family 66 member 2 isoform X6
- Conserved Domains (1) summary
-
- pfam04193
Location:17 → 68
- PQ-loop; PQ loop repeat
-
XM_047437836.1 → XP_047293792.1 solute carrier family 66 member 2 isoform X14
- UniProtKB/TrEMBL
-
K7ERV4
- Related
- ENSP00000468427.1, ENST00000593030.6
-
XM_047437833.1 → XP_047293789.1 solute carrier family 66 member 2 isoform X10
RNA
-
XR_007066224.1 RNA Sequence
-
XR_007066225.1 RNA Sequence
-
XR_007066226.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060942.1 Alternate T2T-CHM13v2.0
- Range
-
80178398..80227221 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054319162.1 → XP_054175137.1 solute carrier family 66 member 2 isoform X15
- UniProtKB/TrEMBL
-
B7Z8S3
-
XM_054319152.1 → XP_054175127.1 solute carrier family 66 member 2 isoform X4
-
XM_054319160.1 → XP_054175135.1 solute carrier family 66 member 2 isoform X13
-
XM_054319151.1 → XP_054175126.1 solute carrier family 66 member 2 isoform X3
- UniProtKB/Swiss-Prot
- B7Z7D9, G5E989, Q8N2U9, Q9H6D0
-
XM_054319149.1 → XP_054175124.1 solute carrier family 66 member 2 isoform X1
-
XM_054319158.1 → XP_054175133.1 solute carrier family 66 member 2 isoform X11
-
XM_054319150.1 → XP_054175125.1 solute carrier family 66 member 2 isoform X2
-
XM_054319156.1 → XP_054175131.1 solute carrier family 66 member 2 isoform X9
-
XM_054319155.1 → XP_054175130.1 solute carrier family 66 member 2 isoform X8
- UniProtKB/TrEMBL
-
B3KW14
-
XM_054319159.1 → XP_054175134.1 solute carrier family 66 member 2 isoform X12
-
XM_054319154.1 → XP_054175129.1 solute carrier family 66 member 2 isoform X7
-
XM_054319153.1 → XP_054175128.1 solute carrier family 66 member 2 isoform X6
-
XM_054319161.1 → XP_054175136.1 solute carrier family 66 member 2 isoform X14
- UniProtKB/TrEMBL
-
K7ERV4
-
XM_054319157.1 → XP_054175132.1 solute carrier family 66 member 2 isoform X10
RNA
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XR_008485023.1 RNA Sequence
-
XR_008485024.1 RNA Sequence
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XR_008485025.1 RNA Sequence