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    Eif3j2 eukaryotic translation initiation factor 3, subunit J2 [ Mus musculus (house mouse) ]

    Gene ID: 100042807, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Eif3j2provided by MGI
    Official Full Name
    eukaryotic translation initiation factor 3, subunit J2provided by MGI
    Primary source
    MGI:MGI:3704486
    See related
    Ensembl:ENSMUSG00000043424 AllianceGenome:MGI:3704486
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm9781; Eif3j-2; eIF3j-B; eIF3 p35
    Summary
    Predicted to enable identical protein binding activity. Predicted to be located in cytosol. Predicted to be part of eukaryotic translation initiation factor 3 complex. Orthologous to human EIF3J (eukaryotic translation initiation factor 3 subunit J). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See Eif3j2 in Genome Data Viewer
    Location:
    18 B3; 18 23.33 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (43608483..43610901, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (43475418..43477836, complement)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene dihydropyrimidinase-like 3 Neighboring gene predicted gene, 41714 Neighboring gene predicted gene 3650 Neighboring gene janus kinase and microtubule interacting protein 2 Neighboring gene STARR-seq mESC enhancer starr_44453 Neighboring gene STARR-seq mESC enhancer starr_44454 Neighboring gene serine peptidase inhibitor, Kazal type 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article
    2. The transcriptional landscape of the mammalian genome. Carninci P, et al. Science, 2005 Sep 2. PMID 16141072
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC91206

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
    		  
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in formation of cytoplasmic translation initiation complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
    		  
    part_of eukaryotic 43S preinitiation complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of eukaryotic 48S preinitiation complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of eukaryotic translation initiation factor 3 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of eukaryotic translation initiation factor 3 complex ISO
    Inferred from Sequence Orthology
    more info
    		  
    part_of eukaryotic translation initiation factor 3 complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 3 subunit J-B
    Names
    eIF-3-alpha
    eIF-3-alpha-B
    eukaryotic translation initiation factor 3 subunit 1
    eukaryotic translation initiation factor 3 subunit 1-B
    eukaryotic translation initiation factor 3 subunit J

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001256055.1 → NP_001242984.1  eukaryotic translation initiation factor 3 subunit J-B

      See identical proteins and their annotated locations for NP_001242984.1

      Status: VALIDATED

      Source sequence(s)
      AC156546
      Consensus CDS
      CCDS57122.1
      UniProtKB/Swiss-Prot
      Q66JS6, Q8BUW6
      UniProtKB/TrEMBL
      Q2YDW1
      Related
      ENSMUSP00000054421.10, ENSMUST00000057110.11
      Conserved Domains (1) summary
      pfam08597
      Location:17 → 263
      eIF3_subunit; Translation initiation factor eIF3 subunit

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      43608483..43610901 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_045706.1: Suppressed sequence

      Description
      NR_045706.1: This RefSeq was permanently suppressed because it is now thought that this gene represents a protein coding gene.
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q66JS6.1 GenPept UniProtKB/Swiss-Prot:Q66JS6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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