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    mix23 mitochondrial matrix import factor 23 [ Danio rerio (zebrafish) ]

    Gene ID: 393780, updated on 2-Nov-2024

    Summary

    Official Symbol
    mix23provided by ZNC
    Official Full Name
    mitochondrial matrix import factor 23provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1780
    See related
    Ensembl:ENSDARG00000045351 AllianceGenome:ZFIN:ZDB-GENE-040426-1780
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    ccdc58; zgc:73369
    Summary
    Predicted to be located in mitochondrial intermembrane space. Predicted to be active in mitochondrion. Is expressed in alar plate midbrain region; digestive system; eye; immature eye; and optic tectum. Orthologous to human MIX23 (mitochondrial matrix import factor 23). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See mix23 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (20922544..20926784, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (20778123..20782407, complement)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene cystatin 14a, tandem duplicate 1 Neighboring gene cystatin 14a, tandem duplicate 2 Neighboring gene family with sequence similarity 162 member A Neighboring gene karyopherin alpha 1 (importin alpha 5)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC73369

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrial intermembrane space IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    protein MIX23
    Names
    coiled-coil domain containing 58
    coiled-coil domain-containing protein 58

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200807.1NP_957101.1  protein MIX23

      See identical proteins and their annotated locations for NP_957101.1

      Status: PROVISIONAL

      Source sequence(s)
      BC059679
      UniProtKB/Swiss-Prot
      Q6PBK1
      Related
      ENSDARP00000106348.2, ENSDART00000130958.3
      Conserved Domains (1) summary
      pfam09774
      Location:2112
      Cid2; Caffeine-induced death protein 2

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      20922544..20926784 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)