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    MIGA1 mitoguardin 1 [ Homo sapiens (human) ]

    Gene ID: 374986, updated on 27-Nov-2024

    Summary

    Official Symbol
    MIGA1provided by HGNC
    Official Full Name
    mitoguardin 1provided by HGNC
    Primary source
    HGNC:HGNC:24741
    See related
    Ensembl:ENSG00000180488 MIM:616773; AllianceGenome:HGNC:24741
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FAM73A
    Summary
    Enables protein heterodimerization activity and protein homodimerization activity. Involved in mitochondrial fusion. Located in mitochondrion and plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in brain (RPKM 8.8), thyroid (RPKM 7.5) and 25 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See MIGA1 in Genome Data Viewer
    Location:
    1p31.1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (77779649..77879540)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (77618463..77718372)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (78245334..78345225)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 33 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1218 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1004 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1219 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1220 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:78241322-78241846 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1221 Neighboring gene actin gamma 1 pseudogene 21 Neighboring gene RNA, 5S ribosomal pseudogene 21 Neighboring gene axin interactor, dorsalization associated pseudogene Neighboring gene nuclear speckle splicing regulatory protein 1 pseudogene 1 Neighboring gene heat shock protein family E (Hsp10) member 1 pseudogene 25 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:78336231-78337101 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1222 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1005 Neighboring gene NEXN antisense RNA 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:78374978-78375131 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:78383688-78384887 Neighboring gene nexilin F-actin binding protein Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1006 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:78431300-78431502 Neighboring gene far upstream element binding protein 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1223 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1224 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1225 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1226 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1227 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1228 Neighboring gene DnaJ heat shock protein family (Hsp40) member B4

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • FLJ35093, DKFZp686M07166

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein heterodimerization activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial fusion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitochondrial fusion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion HTP PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    mitoguardin 1
    Names
    family with sequence similarity 73, member A
    protein FAM73A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001270384.2NP_001257313.1  mitoguardin 1 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS72809.1
      UniProtKB/TrEMBL
      B7ZLZ8
      Conserved Domains (1) summary
      pfam10265
      Location:59604
      DUF2217; Uncharacterized conserved protein (DUF2217)
    2. NM_001363583.1NP_001350512.1  mitoguardin 1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS85989.1
      UniProtKB/TrEMBL
      A0A2R8YF99, B7ZLZ8
      Related
      ENSP00000494964.1, ENST00000645526.1
      Conserved Domains (1) summary
      pfam10265
      Location:27571
      Miga; Mitoguardin
    3. NM_001363584.1NP_001350513.1  mitoguardin 1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS85989.1
      UniProtKB/TrEMBL
      A0A2R8YF99, B7ZLZ8
      Conserved Domains (1) summary
      pfam10265
      Location:27571
      Miga; Mitoguardin
    4. NM_001363586.1NP_001350515.1  mitoguardin 1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS85989.1
      UniProtKB/TrEMBL
      A0A2R8YF99, B7ZLZ8
      Conserved Domains (1) summary
      pfam10265
      Location:27571
      Miga; Mitoguardin
    5. NM_001394566.1NP_001381495.1  mitoguardin 1 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS90979.1
      UniProtKB/TrEMBL
      B4DK63
    6. NM_001394567.1NP_001381496.1  mitoguardin 1 isoform 5

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS90981.1
      UniProtKB/TrEMBL
      A0A2R8YE40, B7ZLZ8, F8W7S1
    7. NM_001394568.1NP_001381497.1  mitoguardin 1 isoform 5

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS90981.1
      UniProtKB/TrEMBL
      A0A2R8YE40, B7ZLZ8, F8W7S1
    8. NM_001394569.1NP_001381498.1  mitoguardin 1 isoform 5

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS90981.1
      UniProtKB/TrEMBL
      A0A2R8YE40, B7ZLZ8, F8W7S1
      Related
      ENSP00000495239.1, ENST00000646892.1
    9. NM_001394570.1NP_001381499.1  mitoguardin 1 isoform 5

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS90981.1
      UniProtKB/TrEMBL
      A0A2R8YE40, B7ZLZ8, F8W7S1
      Related
      ENSP00000393675.4, ENST00000443751.4
    10. NM_001394571.1NP_001381500.1  mitoguardin 1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS85989.1
      UniProtKB/TrEMBL
      A0A2R8YF99, B7ZLZ8
      Conserved Domains (1) summary
      pfam10265
      Location:27571
      Miga; Mitoguardin
    11. NM_001394572.1NP_001381501.1  mitoguardin 1 isoform 6

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      UniProtKB/TrEMBL
      A0AA34QW11, B4DK63
      Related
      ENSP00000518550.1, ENST00000710931.1
    12. NM_001394573.1NP_001381502.1  mitoguardin 1 isoform 7

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS90980.1
      UniProtKB/TrEMBL
      A0A2R8YFQ8
    13. NM_001394574.1NP_001381503.1  mitoguardin 1 isoform 8

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      UniProtKB/TrEMBL
      A0A2R8YGK2, B4DK63
      Related
      ENSP00000496099.2, ENST00000642959.2
    14. NM_001394575.1NP_001381504.1  mitoguardin 1 isoform 9

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      UniProtKB/TrEMBL
      A0A2R8YDC7, A0A2R8YFQ8
    15. NM_001394576.1NP_001381505.1  mitoguardin 1 isoform 9

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      UniProtKB/TrEMBL
      A0A2R8YDC7, A0A2R8YFQ8
      Related
      ENSP00000494444.2, ENST00000645756.2
    16. NM_001416120.1NP_001403049.1  mitoguardin 1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      UniProtKB/TrEMBL
      A0A2R8YF99
      Related
      ENSP00000359827.4, ENST00000370791.9
    17. NM_198549.4NP_940951.1  mitoguardin 1 isoform 1

      See identical proteins and their annotated locations for NP_940951.1

      Status: VALIDATED

      Source sequence(s)
      AC114487, AC138392
      Consensus CDS
      CCDS681.1
      UniProtKB/Swiss-Prot
      Q6MZG0, Q8NAN2
      UniProtKB/TrEMBL
      B7ZLZ8
      Related
      ENSP00000518551.1, ENST00000710932.1
      Conserved Domains (1) summary
      pfam10265
      Location:59603
      DUF2217; Uncharacterized conserved protein (DUF2217)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      77779649..77879540
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      77618463..77718372
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)