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    AMZ2P1 AMZ2 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 201283, updated on 17-Sep-2024

    Summary

    Official Symbol
    AMZ2P1provided by HGNC
    Official Full Name
    AMZ2 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:26491
    See related
    Ensembl:ENSG00000291140 AllianceGenome:HGNC:26491
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in testis (RPKM 9.7), ovary (RPKM 5.2) and 24 other tissues See more
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    Genomic context

    See AMZ2P1 in Genome Data Viewer
    Location:
    17q24.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (64966550..64975585, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (65836519..65845554, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (62962668..62971703, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376844 Neighboring gene leucine rich repeat containing 37 member A3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8853 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:62915421-62915921 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:62915997-62916498 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:62916499-62916998 Neighboring gene RDM1 pseudogene 4 Neighboring gene Sharpr-MPRA regulatory region 3243 Neighboring gene uncharacterized LOC107985000 Neighboring gene SLC16A6 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12602 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:62962191-62962354 Neighboring gene Sharpr-MPRA regulatory region 14154 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8856 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:62971753-62972623 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12603 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12604 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12605 Neighboring gene uncharacterized LOC124904044 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:63023805-63024744 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:63024745-63025684 Neighboring gene G protein subunit alpha 13 Neighboring gene NANOG hESC enhancer GRCh37_chr17:63043783-63044416 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8858 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8859

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • archaelysin family metallopeptidase 2 pseudogene 1
    • putative archaemetzincin-2-like protein

    Clone Names

    • FLJ32065, MGC90301, DKFZp686D22101

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_026903.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC037487, AK056627, AK311317
      Related
      ENST00000430983.6

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      64966550..64975585 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      65836519..65845554 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_153032.1: Suppressed sequence

      Description
      NM_153032.1: This RefSeq was permanently suppressed because it represents the wrong CDS.