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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029599.1 RefSeqGene
- Range
-
4906..29788
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001006610.2 → NP_001006611.1 E3 ubiquitin-protein ligase SIAH1 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) includes an alternate 5' exon and uses an upstream AUG compared to variant 1. The resulting protein (isoform b) is longer and has a distinct N-terminus compared to isoform a.
- Source sequence(s)
-
AC023818, BC042550, BX357983, BX647064, CN360509
- Consensus CDS
-
CCDS32444.1
- UniProtKB/TrEMBL
- B2R9P2, B5BU17
- Related
- ENSP00000349156.3, ENST00000356721.3
- Conserved Domains (2) summary
-
- cd16751
Location:70 → 109
- RING-HC_SIAH1; RING finger, HC subclass, found in seven in absentia homolog 1 (SIAH1) and similar proteins
- pfam03145
Location:113 → 309
- Sina; Seven in absentia protein family
-
NM_003031.4 → NP_003022.3 E3 ubiquitin-protein ligase SIAH1 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the smaller isoform (1).
- Source sequence(s)
-
AC023818, BC018193, BC035562
- Consensus CDS
-
CCDS10735.1
- UniProtKB/Swiss-Prot
- A0FKF3, O43269, Q49A58, Q8IUQ4, Q92880
- UniProtKB/TrEMBL
- B2R9P2, B5BU17
- Related
- ENSP00000378214.2, ENST00000394725.3
- Conserved Domains (2) summary
-
- cd16751
Location:39 → 78
- RING-HC_SIAH1; RING finger, HC subclass, found in seven in absentia homolog 1 (SIAH1) and similar proteins
- pfam03145
Location:82 → 278
- Sina; Seven in absentia protein family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000016.10 Reference GRCh38.p14 Primary Assembly
- Range
-
48360531..48387246 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006721246.3 → XP_006721309.1 E3 ubiquitin-protein ligase SIAH1 isoform X1
- UniProtKB/Swiss-Prot
- A0FKF3, O43269, Q49A58, Q8IUQ4, Q92880
- UniProtKB/TrEMBL
- B2R9P2, B5BU17
- Related
- ENSP00000456421.1, ENST00000568007.5
- Conserved Domains (2) summary
-
- cd16751
Location:39 → 78
- RING-HC_SIAH1; RING finger, HC subclass, found in seven in absentia homolog 1 (SIAH1) and similar proteins
- pfam03145
Location:82 → 278
- Sina; Seven in absentia protein family
-
XM_024450395.2 → XP_024306163.1 E3 ubiquitin-protein ligase SIAH1 isoform X1
- UniProtKB/Swiss-Prot
- A0FKF3, O43269, Q49A58, Q8IUQ4, Q92880
- UniProtKB/TrEMBL
- B2R9P2, B5BU17
- Related
- ENSP00000369343.2, ENST00000380006.2
- Conserved Domains (2) summary
-
- cd16751
Location:39 → 78
- RING-HC_SIAH1; RING finger, HC subclass, found in seven in absentia homolog 1 (SIAH1) and similar proteins
- pfam03145
Location:82 → 278
- Sina; Seven in absentia protein family
Alternate T2T-CHM13v2.0
Genomic
-
NC_060940.1 Alternate T2T-CHM13v2.0
- Range
-
54157789..54184345 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054313710.1 → XP_054169685.1 E3 ubiquitin-protein ligase SIAH1 isoform X1
- UniProtKB/Swiss-Prot
- A0FKF3, O43269, Q49A58, Q8IUQ4, Q92880
- UniProtKB/TrEMBL
- B2R9P2, B5BU17
-
XM_054313711.1 → XP_054169686.1 E3 ubiquitin-protein ligase SIAH1 isoform X1
- UniProtKB/Swiss-Prot
- A0FKF3, O43269, Q49A58, Q8IUQ4, Q92880
- UniProtKB/TrEMBL
- B2R9P2, B5BU17
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001006611.1: Suppressed sequence
- Description
- NM_001006611.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.