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    Gal3st2b galactose-3-O-sulfotransferase 2B [ Mus musculus (house mouse) ]

    Gene ID: 100041596, updated on 4-Jan-2025

    Summary

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    Official Symbol
    Gal3st2bprovided by MGI
    Official Full Name
    galactose-3-O-sulfotransferase 2Bprovided by MGI
    Primary source
    MGI:MGI:3711964
    See related
    Ensembl:ENSMUSG00000093805 AllianceGenome:MGI:3711964
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm988; Gm9994; Gal3st2; Gal3ST-2
    Summary
    Predicted to enable sulfotransferase activity. Orthologous to human GAL3ST2 (galactose-3-O-sulfotransferase 2). [provided by Alliance of Genome Resources, Jan 2025]
    Expression
    Biased expression in duodenum adult (RPKM 41.6), small intestine adult (RPKM 39.0) and 2 other tissues See more
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    Genomic context

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    See Gal3st2b in Genome Data Viewer
    Location:
    1 D; 1 47.41 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (93846159..93870367)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (93918437..93942645)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene galactose-3-O-sulfotransferase 2 Neighboring gene STARR-seq mESC enhancer starr_01736 Neighboring gene STARR-seq mESC enhancer starr_01737 Neighboring gene STARR-seq mESC enhancer starr_01738 Neighboring gene D-2-hydroxyglutarate dehydrogenase pseudogene Neighboring gene D-2-hydroxyglutarate dehydrogenase pseudogene Neighboring gene galactose-3-O-sulfotransferase 2C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Porcine, mouse and human galactose 3-O-sulphotransferase-2 enzymes have different substrate specificities; the porcine enzyme requires basic compounds for its catalytic activity. Seko A, et al. Biochem J, 2005 Oct 1. PMID 15926885, Free PMC Article
    2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    enables sulfotransferase activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    galactose-3-O-sulfotransferase 2
    Names
    beta-galactose-3-O-sulfotransferase 2
    gal-beta-1, 3-GalNAc 3'-sulfotransferase 2
    NP_001192178.1
    XP_006529115.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205249.1 → NP_001192178.1  galactose-3-O-sulfotransferase 2

      See identical proteins and their annotated locations for NP_001192178.1

      Status: PROVISIONAL

      Source sequence(s)
      AY216522
      Consensus CDS
      CCDS56641.1
      UniProtKB/Swiss-Prot
      Q6XQH0
      UniProtKB/TrEMBL
      Q3UN22
      Related
      ENSMUSP00000136012.2, ENSMUST00000178757.8
      Conserved Domains (1) summary
      cl22970
      Location:11 → 380
      Sulfotransfer_2; Sulfotransferase family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      93846159..93870367
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006529052.3 → XP_006529115.1  galactose-3-O-sulfotransferase 2 isoform X1

      UniProtKB/TrEMBL
      J3QMJ1, Q3UN22
      Related
      ENSMUSP00000136311.2, ENSMUST00000177958.2
      Conserved Domains (1) summary
      cl22970
      Location:1 → 382
      Sulfotransfer_2; Sulfotransferase family
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6XQH0.1 GenPept UniProtKB/Swiss-Prot:Q6XQH0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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