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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_009098.1 RefSeqGene
- Range
-
5016..62831
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001039348.3 → NP_001034437.1 EGF-containing fibulin-like extracellular matrix protein 1 precursor
See identical proteins and their annotated locations for NP_001034437.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) represents the longer transcript. Variants 2 and 3 encode the same protein.
- Source sequence(s)
-
AC010895, AK290599, AK312639, U03877
- Consensus CDS
-
CCDS1857.1
- UniProtKB/Swiss-Prot
- A8K3I4, B4DW75, D6W5D2, Q12805, Q541U7
- UniProtKB/TrEMBL
- A0A0S2Z4F1, A8KAJ3, B2R6M6
- Related
- ENSP00000347596.3, ENST00000355426.8
- Conserved Domains (3) summary
-
- smart00179
Location:214 → 244
- EGF_CA; Calcium-binding EGF-like domain
- pfam07645
Location:173 → 206
- EGF_CA; Calcium-binding EGF domain
- pfam12662
Location:274 → 297
- cEGF; Complement Clr-like EGF-like
-
NM_001039349.3 → NP_001034438.1 EGF-containing fibulin-like extracellular matrix protein 1 precursor
See identical proteins and their annotated locations for NP_001034438.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 2. Variants 2 and 3 encode the same protein.
- Source sequence(s)
-
AC010895, BC014410, DA264704, U03877
- Consensus CDS
-
CCDS1857.1
- UniProtKB/Swiss-Prot
- A8K3I4, B4DW75, D6W5D2, Q12805, Q541U7
- UniProtKB/TrEMBL
- A0A0S2Z4F1, A8KAJ3, B2R6M6
- Related
- ENSP00000378058.2, ENST00000394555.6
- Conserved Domains (3) summary
-
- smart00179
Location:214 → 244
- EGF_CA; Calcium-binding EGF-like domain
- pfam07645
Location:173 → 206
- EGF_CA; Calcium-binding EGF domain
- pfam12662
Location:274 → 297
- cEGF; Complement Clr-like EGF-like
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
55865967..55923782 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017003586.3 → XP_016859075.1 EGF-containing fibulin-like extracellular matrix protein 1 isoform X1
- UniProtKB/TrEMBL
- A0A0S2Z3V1, A8KAJ3, B2R6M6
- Conserved Domains (2) summary
-
- smart00179
Location:214 → 253
- EGF_CA; Calcium-binding EGF-like domain
- pfam07645
Location:173 → 206
- EGF_CA; Calcium-binding EGF domain
-
XM_005264205.5 → XP_005264262.2 EGF-containing fibulin-like extracellular matrix protein 1 isoform X1
- UniProtKB/TrEMBL
- A0A0S2Z3V1, A8KAJ3, B2R6M6
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
55862877..55920674 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054341033.1 → XP_054197008.1 EGF-containing fibulin-like extracellular matrix protein 1 isoform X1
- UniProtKB/TrEMBL
- A0A0S2Z3V1, A8KAJ3, B2R6M6
-
XM_054341032.1 → XP_054197007.1 EGF-containing fibulin-like extracellular matrix protein 1 isoform X1
- UniProtKB/TrEMBL
- A0A0S2Z3V1, A8KAJ3, B2R6M6
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_004105.3: Suppressed sequence
- Description
- NM_004105.3: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
-
NM_018894.1: Suppressed sequence
- Description
- NM_018894.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.