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    OR1L3 olfactory receptor family 1 subfamily L member 3 [ Homo sapiens (human) ]

    Gene ID: 26735, updated on 27-Nov-2024

    Summary

    Official Symbol
    OR1L3provided by HGNC
    Official Full Name
    olfactory receptor family 1 subfamily L member 3provided by HGNC
    Primary source
    HGNC:HGNC:8215
    See related
    Ensembl:ENSG00000171481 AllianceGenome:HGNC:8215
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    OR9-D; OR9-28
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
    Orthologs
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    Genomic context

    See OR1L3 in Genome Data Viewer
    Location:
    9q33.2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (122675130..122676104)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (134872454..134873428)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (125437409..125438383)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902265 Neighboring gene olfactory receptor family 1 subfamily B member 1 Neighboring gene MPRA-validated peak7331 silencer Neighboring gene olfactory receptor family 1 subfamily L member 1 Neighboring gene tousled like kinase 1 pseudogene 1 Neighboring gene olfactory receptor family 1 subfamily L member 4

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in detection of chemical stimulus involved in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    olfactory receptor 1L3
    Names
    olfactory receptor 9-D
    olfactory receptor OR9-28

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005234.1NP_001005234.1  olfactory receptor 1L3

      See identical proteins and their annotated locations for NP_001005234.1

      Status: VALIDATED

      Source sequence(s)
      AB065492
      Consensus CDS
      CCDS35128.1
      UniProtKB/Swiss-Prot
      B2RNF4, Q6IFN1, Q8NH93
      UniProtKB/TrEMBL
      A0A126GVD1
      Related
      ENSP00000302863.2, ENST00000304820.5
      Conserved Domains (1) summary
      cd15235
      Location:24300
      7tmA_OR1A-like; olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      122675130..122676104
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      134872454..134873428
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)