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    Nms neuromedin S [ Mus musculus (house mouse) ]

    Gene ID: 433292, updated on 28-Oct-2024

    Summary

    Official Symbol
    Nmsprovided by MGI
    Official Full Name
    neuromedin Sprovided by MGI
    Primary source
    MGI:MGI:3583618
    See related
    Ensembl:ENSMUSG00000067604 AllianceGenome:MGI:3583618
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    This gene encodes a member of the neuromedin family of neuropeptides. The encoded protein is a precursor that is proteolytically processed to generate a biologically active neuropeptide that plays a role in the regulation of circadian rhythm, anorexigenic action, antidiuretic action, cardiovascular function and stimulation of oxytocin and vasopressin release. Mice lacking the encoded neuropeptide exhibit decreased heart rate without any accompanying changes in blood pressure. Alternative splicing results in multiple transcript variants encoding different isoforms that may undergo similar processing to generate the mature peptide. [provided by RefSeq, Aug 2015]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Genomic context

    See Nms in Genome Data Viewer
    Location:
    1 B; 1 17.31 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (38978230..38989357)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (38939149..38950276)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene carbohydrate sulfotransferase 10 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:38942945-38943098 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E4310 Neighboring gene predicted gene, 35171 Neighboring gene phosducin-like 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    neuromedin-S
    Names
    neuromedin S precursor-related peptide/neuromedin S preproprotein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001011684.2NP_001011684.3  neuromedin-S isoform 1 preproprotein

      See identical proteins and their annotated locations for NP_001011684.3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer protein (isoform 1).
      Source sequence(s)
      AC101277, BQ175462, BU609935
      Consensus CDS
      CCDS14902.1
      UniProtKB/Swiss-Prot
      B2RSM4, Q5H8A1
      UniProtKB/TrEMBL
      A0A250SH12, E0CXN4
      Related
      ENSMUSP00000085346.2, ENSMUST00000088029.8
    2. NM_001311788.1NP_001298717.1  neuromedin-S isoform 2 precursor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) lacks an alternate in-frame exon in the coding region, compared to variant 1. The encoded isoform (2) is shorter than isoform 1. This isoform (2) may undergo proteolytic processing similar to isoform 1.
      Source sequence(s)
      AC101277, BQ175462, BU609935
      UniProtKB/TrEMBL
      E0CXN4
      Related
      ENSMUSP00000125166.2, ENSMUST00000160214.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      38978230..38989357
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)