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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001164167.1 → NP_001157639.1 E3 SUMO-protein ligase PIAS2 isoform 2
See identical proteins and their annotated locations for NP_001157639.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region, compared to variant 1. This results in a frameshift and distinct C-terminus in isoform 2, compared to isoform 1.
- Source sequence(s)
-
AK029716, AK032463, AK086653
- UniProtKB/Swiss-Prot
-
Q8C5D8
- UniProtKB/TrEMBL
-
Q3V3U5
- Conserved Domains (3) summary
-
- smart00513
Location:11 → 45
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- pfam02891
Location:342 → 390
- zf-MIZ; MIZ/SP-RING zinc finger
- pfam14324
Location:145 → 282
- PINIT; PINIT domain
-
NM_001164168.1 → NP_001157640.1 E3 SUMO-protein ligase PIAS2 isoform 3
See identical proteins and their annotated locations for NP_001157640.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) contains an alternate exon in the 5' coding region and uses a downstream start codon, compared to variant 1. Isoform 3 has a shorter and distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK032463, AK086653, BU704371
- Consensus CDS
-
CCDS50324.1
- UniProtKB/TrEMBL
-
G3UWE3
- Related
- ENSMUSP00000131485.2, ENSMUST00000168882.9
- Conserved Domains (3) summary
-
- smart00513
Location:4 → 38
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- pfam02891
Location:335 → 383
- zf-MIZ; MIZ/SP-RING zinc finger
- pfam14324
Location:138 → 275
- PINIT; PINIT domain
-
NM_001164169.1 → NP_001157641.1 E3 SUMO-protein ligase PIAS2 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains an alternate exon in the 3' coding region, resulting in a translational frameshift, compared to variant 1. The resulting protein (isoform 4) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC157991, AK014871, AK029716
- UniProtKB/Swiss-Prot
-
Q8C5D8
- Conserved Domains (3) summary
-
- smart00513
Location:11 → 45
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- pfam02891
Location:342 → 390
- zf-MIZ; MIZ/SP-RING zinc finger
- pfam14324
Location:145 → 282
- PINIT; PINIT domain
-
NM_001164170.1 → NP_001157642.1 E3 SUMO-protein ligase PIAS2 isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) has multiple differences in the coding region, compared to variant 1, one of which results in a translational frameshift. The resulting protein (isoform 5) has a distinct N- and C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC157991, AK014871, AK086653, BU704371
- Consensus CDS
-
CCDS50323.1
- UniProtKB/TrEMBL
-
F8WHS8
- Related
- ENSMUSP00000110424.3, ENSMUST00000114776.4
- Conserved Domains (3) summary
-
- smart00513
Location:4 → 38
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- pfam02891
Location:335 → 383
- zf-MIZ; MIZ/SP-RING zinc finger
- pfam14324
Location:138 → 275
- PINIT; PINIT domain
-
NM_008602.4 → NP_032628.3 E3 SUMO-protein ligase PIAS2 isoform 1
See identical proteins and their annotated locations for NP_032628.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC157991, AK029716, AK032463
- Consensus CDS
-
CCDS37866.1
- UniProtKB/Swiss-Prot
- O54987, Q8C384, Q8C5D8, Q8CDQ8, Q8K208, Q99JX5, Q9D5W7, Q9QZ63
- Related
- ENSMUSP00000110425.3, ENSMUST00000114777.10
- Conserved Domains (3) summary
-
- smart00513
Location:11 → 45
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- pfam02891
Location:342 → 390
- zf-MIZ; MIZ/SP-RING zinc finger
- pfam14324
Location:145 → 282
- PINIT; PINIT domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000084.7 Reference GRCm39 C57BL/6J
- Range
-
77152883..77243406
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006526423.4 → XP_006526486.1 E3 SUMO-protein ligase PIAS2 isoform X1
- Conserved Domains (3) summary
-
- smart00513
Location:11 → 45
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- cd16790
Location:343 → 390
- SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
- pfam14324
Location:147 → 291
- PINIT; PINIT domain
-
XM_036161018.1 → XP_036016911.1 E3 SUMO-protein ligase PIAS2 isoform X4
- Conserved Domains (3) summary
-
- smart00513
Location:11 → 45
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- cd16790
Location:343 → 390
- SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
- pfam14324
Location:147 → 296
- PINIT; PINIT domain
-
XM_036161019.1 → XP_036016912.1 E3 SUMO-protein ligase PIAS2 isoform X4
- Conserved Domains (3) summary
-
- smart00513
Location:11 → 45
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- cd16790
Location:343 → 390
- SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
- pfam14324
Location:147 → 296
- PINIT; PINIT domain
-
XM_036161020.1 → XP_036016913.1 E3 SUMO-protein ligase PIAS2 isoform X4
- Conserved Domains (3) summary
-
- smart00513
Location:11 → 45
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- cd16790
Location:343 → 390
- SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
- pfam14324
Location:147 → 296
- PINIT; PINIT domain
-
XM_006526425.4 → XP_006526488.1 E3 SUMO-protein ligase PIAS2 isoform X2
- Conserved Domains (3) summary
-
- smart00513
Location:4 → 38
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- cd16790
Location:336 → 383
- SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
- pfam14324
Location:140 → 284
- PINIT; PINIT domain
-
XM_036161017.1 → XP_036016910.1 E3 SUMO-protein ligase PIAS2 isoform X3
- Conserved Domains (3) summary
-
- smart00513
Location:4 → 38
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- cd16790
Location:336 → 383
- SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
- pfam14324
Location:140 → 289
- PINIT; PINIT domain
-
XM_036161021.1 → XP_036016914.1 E3 SUMO-protein ligase PIAS2 isoform X5
- Conserved Domains (3) summary
-
- smart00513
Location:4 → 38
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- cd16790
Location:336 → 383
- SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
- pfam14324
Location:140 → 289
- PINIT; PINIT domain
-
XM_036161023.1 → XP_036016916.1 E3 SUMO-protein ligase PIAS2 isoform X5
- Conserved Domains (3) summary
-
- smart00513
Location:4 → 38
- SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
- cd16790
Location:336 → 383
- SP-RING_PIAS; SP-RING finger found in protein inhibitor of activated signal transducer and activator of transcription (PIAS) proteins
- pfam14324
Location:140 → 289
- PINIT; PINIT domain
RNA
-
XR_001782348.3 RNA Sequence
-
XR_001782349.3 RNA Sequence