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    Eeig2 EEIG family member 2 [ Mus musculus (house mouse) ]

    Gene ID: 329739, updated on 28-Oct-2024

    Summary

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    Official Symbol
    Eeig2provided by MGI
    Official Full Name
    EEIG family member 2provided by MGI
    Primary source
    MGI:MGI:3036259
    See related
    Ensembl:ENSMUSG00000040339 AllianceGenome:MGI:3036259
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Fam102b; 1600010D10Rik; B430201A12Rik
    Summary
    Is expressed in nervous system. Orthologous to human EEIG2 (EEIG family member 2). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Broad expression in subcutaneous fat pad adult (RPKM 11.4), CNS E18 (RPKM 10.5) and 23 other tissues See more
    Orthologs
    human all
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    Genomic context

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    See Eeig2 in Genome Data Viewer
    Location:
    3 F3; 3 48.04 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (108878313..108935588, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (108970997..109027607, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene fibronectin type III domain containing 7 Neighboring gene STARR-positive B cell enhancer ABC_E3460 Neighboring gene STARR-positive B cell enhancer ABC_E4576 Neighboring gene PRP38 pre-mRNA processing factor 38 (yeast) domain containing B Neighboring gene HEN1 methyltransferase homolog 1 (Arabidopsis) Neighboring gene predicted gene 43221 Neighboring gene STARR-positive B cell enhancer mm9_chr3:108830639-108830939 Neighboring gene STARR-positive B cell enhancer mm9_chr3:108865935-108866236 Neighboring gene predicted gene, 36778 Neighboring gene solute carrier family 25, member 54

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. In vivo and in vitro investigations of heterozygous nebulin knock-out mice disclose a mild skeletal muscle phenotype. Gineste C, et al. Neuromuscul Disord, 2013 Apr. PMID 23375831
    2. Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method. Piao Y, et al. Genome Res, 2001 Sep. PMID 11544199, Free PMC Article
    3. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    EEIG family member 2
    Names
    family with sequence similarity 102, member B
    protein FAM102B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001163567.1 → NP_001157039.1  EEIG family member 2

      Status: VALIDATED

      Source sequence(s)
      AK046595, AL671894, AL671921
      Consensus CDS
      CCDS51051.1
      UniProtKB/Swiss-Prot
      Q8BQS4
      UniProtKB/TrEMBL
      E9Q4R1
      Related
      ENSMUSP00000131904.2, ENSMUST00000171143.2
      Conserved Domains (1) summary
      pfam10358
      Location:9 → 149
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      108878313..108935588 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036163141.1 → XP_036019034.1  EEIG family member 2 isoform X1

      UniProtKB/Swiss-Prot
      Q8BQS4
      Conserved Domains (1) summary
      pfam10358
      Location:9 → 149
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8BQS4.2 GenPept UniProtKB/Swiss-Prot:Q8BQS4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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