U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Cyp51 cytochrome P450, family 51 [ Mus musculus (house mouse) ]

    Gene ID: 13121, updated on 28-Oct-2024

    Summary

    Official Symbol
    Cyp51provided by MGI
    Official Full Name
    cytochrome P450, family 51provided by MGI
    Primary source
    MGI:MGI:106040
    See related
    Ensembl:ENSMUSG00000001467 AllianceGenome:MGI:106040
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ldm; CYPLI; P450LI; Cyp51a1; P450-14DM
    Summary
    Predicted to enable heme binding activity and sterol 14-demethylase activity. Involved in negative regulation of amyloid-beta clearance; negative regulation of protein catabolic process; and negative regulation of protein secretion. Predicted to be located in acrosomal vesicle. Is expressed in several structures, including early conceptus; genitourinary system; integumental system; jaw; and nervous system. Orthologous to human CYP51A1 (cytochrome P450 family 51 subfamily A member 1). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Ubiquitous expression in CNS E18 (RPKM 27.0), CNS E11.5 (RPKM 23.5) and 27 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Cyp51 in Genome Data Viewer
    Location:
    5 A1; 5 2.3 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (4130674..4154697, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (4080674..4104697, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene A kinase anchor protein 9 Neighboring gene Wdr46 retrotransposed pseudogene Neighboring gene predicted gene, 40260 Neighboring gene STARR-positive B cell enhancer ABC_E2737 Neighboring gene STARR-seq mESC enhancer starr_12323 Neighboring gene STARR-seq mESC enhancer starr_12324 Neighboring gene STARR-positive B cell enhancer ABC_E3561 Neighboring gene mitochondrial transcription termination factor 1b Neighboring gene STARR-seq mESC enhancer starr_12326 Neighboring gene predicted gene, 40261 Neighboring gene STARR-seq mESC enhancer starr_12327 Neighboring gene STARR-seq mESC enhancer starr_12328

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables heme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables heme binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sterol 14-demethylase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables sterol 14-demethylase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables sterol 14-demethylase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in acrosomal vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    lanosterol 14-alpha demethylase
    Names
    cytochrome P450 51A1
    cytochrome P450, 51
    cytochrome P450-14DM
    cytochrome P45014DM
    cytochrome P450LI
    sterol 14-alpha demethylase
    NP_064394.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020010.2NP_064394.2  lanosterol 14-alpha demethylase

      See identical proteins and their annotated locations for NP_064394.2

      Status: VALIDATED

      Source sequence(s)
      AC064793, AC068609, AK028815, CB524876
      Consensus CDS
      CCDS19071.1
      UniProtKB/Swiss-Prot
      Q8BSQ7, Q8K0C4, Q9JIP8, Q9JIY3
      Related
      ENSMUSP00000001507.5, ENSMUST00000001507.5
      Conserved Domains (1) summary
      cl12078
      Location:67477
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      4130674..4154697 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)