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    SNORD54 small nucleolar RNA, C/D box 54 [ Homo sapiens (human) ]

    Gene ID: 26795, updated on 2-Nov-2024

    Summary

    Official Symbol
    SNORD54provided by HGNC
    Official Full Name
    small nucleolar RNA, C/D box 54provided by HGNC
    Primary source
    HGNC:HGNC:10204
    See related
    Ensembl:ENSG00000238650 AllianceGenome:HGNC:10204
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    U54; RNU54
    Summary
    Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See SNORD54 in Genome Data Viewer
    Location:
    8q12.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (56073839..56073901, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (56450841..56450903, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (56986398..56986460, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene RNA, 7SL, cytoplasmic 323, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19209 Neighboring gene NANOG hESC enhancer GRCh37_chr8:56960415-56960946 Neighboring gene proteasome 26S subunit, ATPase, 6 pseudogene 1 Neighboring gene ribosomal protein S20 Neighboring gene competing endogenous lncRNA 3 for miR-645 Neighboring gene nucleophosmin 1 pseudogene 21

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • RNA, U54 small nuclear
    • U54 small nuclear RNA
    • U54 snoRNA

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002437.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      X96653
      Related
      ENST00000459159.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      56073839..56073901 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      56450841..56450903 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)