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    Gm5592 predicted gene 5592 [ Mus musculus (house mouse) ]

    Gene ID: 434172, updated on 28-Oct-2024

    Summary

    Official Symbol
    Gm5592provided by MGI
    Official Full Name
    predicted gene 5592provided by MGI
    Primary source
    MGI:MGI:3648691
    See related
    Ensembl:ENSMUSG00000072259 AllianceGenome:MGI:3648691
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG434172
    Summary
    Orthologous to human C2orf78 (chromosome 2 open reading frame 78). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Restricted expression toward testis adult (RPKM 3.6) See more
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    Genomic context

    See Gm5592 in Genome Data Viewer
    Location:
    7 B3; 7 28.21 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (40933751..40939607)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (41284327..41290183)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34811 Neighboring gene predicted gene 6866 Neighboring gene topoisomerase (DNA) II binding protein 1, pseudogene 1 Neighboring gene baculoviral IAP repeat-containing 4 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein C2orf78 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033782.3NP_001028954.1  uncharacterized protein C2orf78 homolog

      See identical proteins and their annotated locations for NP_001028954.1

      Status: PREDICTED

      Source sequence(s)
      AC137152
      Consensus CDS
      CCDS52209.1
      UniProtKB/Swiss-Prot
      B2RW58, Q3V0A6
      Related
      ENSMUSP00000094809.3, ENSMUST00000097044.3
      Conserved Domains (1) summary
      pfam15442
      Location:435580
      DUF4629; Domain of unknown function (DUF4629)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      40933751..40939607
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)