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    FGFBP1 fibroblast growth factor binding protein 1 [ Homo sapiens (human) ]

    Gene ID: 9982, updated on 27-Nov-2024

    Summary

    Official Symbol
    FGFBP1provided by HGNC
    Official Full Name
    fibroblast growth factor binding protein 1provided by HGNC
    Primary source
    HGNC:HGNC:19695
    See related
    Ensembl:ENSG00000137440 MIM:607737; AllianceGenome:HGNC:19695
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FGFBP; HBP17; FGF-BP; FGF-BP1; FGFBP-1
    Summary
    This gene encodes a secreted fibroblast growth factor carrier protein. The encoded protein plays a critical role in cell proliferation, differentiation and migration by binding to fibroblast growth factors and potentiating their biological effects on target cells. The encoded protein may also play a role in tumor growth as an angiogenic switch molecule, and expression of this gene has been associated with several types of cancer including pancreatic and colorectal adenocarcinoma. A pseudogene of this gene is also located on the short arm of chromosome 4. [provided by RefSeq, Nov 2011]
    Expression
    Biased expression in esophagus (RPKM 137.5), skin (RPKM 14.8) and 1 other tissue See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See FGFBP1 in Genome Data Viewer
    Location:
    4p15.32
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (15935577..15938740, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (15917258..15920421, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (15937200..15940363, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:15779736-15780378 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15301 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15302 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:15793453-15794134 Neighboring gene CD38 molecule Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:15813935-15814654 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:15854353-15854546 Neighboring gene hypoxanthine phosphoribosyltransferase 1 pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:15911215-15911375 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:15964828-15965669 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr4:15982103-15982696 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:15982697-15983289 Neighboring gene fibroblast growth factor binding protein 2 Neighboring gene prominin 1 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    HIV-1 interactions

    Protein interactions

    Protein Gene Interaction Pubs
    Tat tat HIV-1 Tat protein, but not HIV-1 Nef and gp120 proteins, competes with FGF-2 for binding to fibroblast growth factor binding protein 1 (FGF-BP1) PubMed

    Go to the HIV-1, Human Interaction Database

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables fibroblast growth factor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables growth factor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables heparin binding TAS
    Traceable Author Statement
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular region TAS
    Traceable Author Statement
    more info
     
    located_in extracellular space TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    fibroblast growth factor-binding protein 1
    Names
    17 kDa HBGF-binding protein
    17 kDa heparin-binding growth factor-binding protein
    FGF-binding protein 1
    heparin-binding growth factor binding protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_005130.5NP_005121.1  fibroblast growth factor-binding protein 1 precursor

      See identical proteins and their annotated locations for NP_005121.1

      Status: REVIEWED

      Source sequence(s)
      AC005798, AK291307, AW959908, BC008910
      Consensus CDS
      CCDS3418.1
      UniProtKB/Swiss-Prot
      A8K5J2, Q14512
      Related
      ENSP00000371770.1, ENST00000382333.2
      Conserved Domains (1) summary
      pfam06473
      Location:22231
      FGF-BP1; FGF binding protein 1 (FGF-BP1)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      15935577..15938740 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      15917258..15920421 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)