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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001349877.1 → NP_001336806.1 ras-related protein Rab-36 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AB023061, AC000102, AF133588, BC017436, BC104991, BM681181, HY044604
- Conserved Domains (1) summary
-
- cd04108
Location:148 → 313
- Rab36_Rab34; Rab GTPase families 34 (Rab34) and 36 (Rab36)
-
NM_001349878.1 → NP_001336807.1 ras-related protein Rab-36 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region uses an alternate splice site in the 3' coding region, which results in a frameshift and a shorter 3' UTR, compared to variant 1. The encoded isoform (2) is shorter, lacks an internal segment and contains a distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AB023061, AC000102, AF133588, BC017436, BM681181, HY044604
- Conserved Domains (1) summary
-
- cl21455
Location:124 → 266
- P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
-
NM_004914.5 → NP_004905.3 ras-related protein Rab-36 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. The encoded isoform (3) has the same N- and C-termini, but is shorter than isoform 1.
- Source sequence(s)
-
AC000029, AC000102
- Consensus CDS
-
CCDS13805.2
- UniProtKB/Swiss-Prot
- O95755, Q2M390, Q7Z4A9, Q9UHP5
- Related
- ENSP00000263116.3, ENST00000263116.8
- Conserved Domains (1) summary
-
- cd04108
Location:58 → 223
- Rab36_Rab34; Rab GTPase families 34 (Rab34) and 36 (Rab36)
RNA
-
NR_146295.3 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an alternate internal exon and uses an alternate splice site in an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AB023061, AC000102, AF133588, BC017436, BM681181