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    LOC4343852 protein EGG APPARATUS-1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4343852, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4343852
    Gene description
    protein EGG APPARATUS-1
    Locus tag
    OSNPB_070605400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4343852 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (25034621..25035305)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (24809648..24810369)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene MADS-box transcription factor 18-like Neighboring gene uncharacterized LOC107281531 Neighboring gene protein MAIN-LIKE 1-like Neighboring gene cytosolic sulfotransferase 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein EGG APPARATUS-1
    Names
    OSJNBb0040H10.32
    Os07g0605400

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      25034621..25035305
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015789826.3 → XP_015645312.1  protein EGG APPARATUS-1

      UniProtKB/TrEMBL
      B9FYB5, Q0D4T3, Q6Z4F5
    Nucleotide Protein
    Heading Accession and Version

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