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    LOC4333310 MOB kinase activator-like 1A [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4333310, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4333310
    Gene description
    MOB kinase activator-like 1A
    Locus tag
    OSNPB_030577200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Ubiquitous expression in flower buds (RPKM 123.2), flowers (RPKM 116.1) and 6 other tissues See more
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    Genomic context

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    See LOC4333310 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (21966657..21970108)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (21108774..21112294)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein uS3y Neighboring gene small nucleolar RNA snoR143 Neighboring gene kinetochore protein NUF2 homolog Neighboring gene uncharacterized LOC4333311 Neighboring gene probable beta-1,3-galactosyltransferase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein kinase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MOB kinase activator-like 1A
    Names
    Os03g0577200

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      21966657..21970108
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015772387.3 → XP_015627873.1  MOB kinase activator-like 1A

      UniProtKB/TrEMBL
      A0A0P0VZH7, B8BAZ0, Q0DQN3, Q75G93
      Conserved Domains (1) summary
      pfam03637
      Location:33 → 204
      Mob1_phocein; Mob1/phocein family
    Nucleotide Protein
    Heading Accession and Version

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