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    LOC4326294 ricin B-like lectin R40G3 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326294, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4326294
    Gene description
    ricin B-like lectin R40G3
    Locus tag
    OSNPB_010104400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4326294 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (231542..233711)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (226902..229291)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene C-type lectin receptor-like tyrosine-protein kinase At1g52310 Neighboring gene protein NCA1 Neighboring gene NAC transcription factor 29 Neighboring gene NAC domain-containing protein 20-like Neighboring gene light-mediated development protein DET1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ricin B-like lectin R40G3
    Names
    Os01g0104400
    P0436E04.19

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      231542..233711
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015765520.3 → XP_015621006.1  ricin B-like lectin R40G3

      UniProtKB/TrEMBL
      A0A0P0UXM9, A2ZNA8, Q9FTY4
      Conserved Domains (2) summary
      PHA03247
      Location:26 → 115
      PHA03247; large tegument protein UL36; Provisional
      pfam07174
      Location:25 → 66
      FAP; Fibronectin-attachment protein (FAP)
    Nucleotide Protein
    Heading Accession and Version

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