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    LOC4337558 uncharacterized LOC4337558 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4337558, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4337558
    Gene description
    uncharacterized LOC4337558
    Locus tag
    OSNPB_050105500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4337558 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (307261..311638)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (299378..303767)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene GTP-binding protein YPTM1 Neighboring gene tubulin-folding cofactor E Neighboring gene uncharacterized LOC4337559 Neighboring gene protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4337558
    Names
    Os05g0105500

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      307261..311638
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066310566.1 → XP_066166663.1  uncharacterized protein LOC4337558

      UniProtKB/TrEMBL
      A0A8J8Y1K1, B7F978, B9FM13

    2. XM_015784591.2 → XP_015640077.1  uncharacterized protein LOC4337558

      UniProtKB/TrEMBL
      A0A8J8Y1K1, B7F978, B8AWW0, B9FM13
      Conserved Domains (1) summary
      cl01261
      Location:21 → 159
      DUF2062; Uncharacterized protein conserved in bacteria (DUF2062)

    3. XM_015784590.2 → XP_015640076.1  uncharacterized protein LOC4337558

      UniProtKB/TrEMBL
      A0A8J8Y1K1, B7F978, B8AWW0, B9FM13
      Conserved Domains (1) summary
      cl01261
      Location:21 → 159
      DUF2062; Uncharacterized protein conserved in bacteria (DUF2062)

    4. XM_066310565.1 → XP_066166662.1  uncharacterized protein LOC4337558

      UniProtKB/TrEMBL
      A0A8J8Y1K1, B7F978, B9FM13

    5. XM_015784592.3 → XP_015640078.1  uncharacterized protein LOC4337558

      UniProtKB/TrEMBL
      A0A8J8Y1K1, B7F978, B8AWW0, B9FM13
      Conserved Domains (1) summary
      cl01261
      Location:21 → 159
      DUF2062; Uncharacterized protein conserved in bacteria (DUF2062)
    Nucleotide Protein
    Heading Accession and Version

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