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    LOC9269932 uncharacterized LOC9269932 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9269932, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9269932
    Gene description
    uncharacterized LOC9269932
    Locus tag
    OSNPB_070607300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC9269932 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (25181192..25185558)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (24956206..24960620)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107275924 Neighboring gene uncharacterized LOC4343859 Neighboring gene pectinesterase QRT1 Neighboring gene uncharacterized LOC4343862

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC9269932
    Names
    OSJNBa0072I06.22-1
    OSJNBa0072I06.22-2
    Os07g0607300
    P0493C06.37-1
    P0493C06.37-2
    agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein-like
    putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      25181192..25185558
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015791227.3 → XP_015646713.1  uncharacterized protein LOC9269932 isoform X1

      UniProtKB/TrEMBL
      A0A0P0X8M0, A2YNJ7, Q69J34, Q69RE6
      Conserved Domains (3) summary
      cd04721
      Location:158 → 287
      BAH_plant_1; BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these ...
      pfam05641
      Location:383 → 442
      Agenet; Agenet domain
      cl22958
      Location:469 → 525
      Agenet; Agenet domain

    2. XM_066312202.1 → XP_066168299.1  uncharacterized protein LOC9269932 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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