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    LOC4334871 COP1-interacting protein 7 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4334871, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4334871
    Gene description
    COP1-interacting protein 7
    Locus tag
    OSNPB_030861100
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4334871 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (37326805..37337585)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (36347803..36358589)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene DIBOA-glucoside dioxygenase BX6 Neighboring gene myosin-6 Neighboring gene transcriptional corepressor LEUNIG_HOMOLOG Neighboring gene uncharacterized LOC4334870 Neighboring gene probable aquaporin PIP2-8 Neighboring gene heavy metal-associated isoprenylated plant protein 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    COP1-interacting protein 7
    Names
    Os03g0861100

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001419030.1 → NP_001405959.1  COP1-interacting protein 7

      Status: VALIDATED

      Source sequence(s)
      AK100706, AP014959
      UniProtKB/TrEMBL
      Q0DLJ6, Q10A91

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      37326805..37337585
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003241382.2 RNA Sequence

    2. XR_003241383.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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