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    LOC4329723 ent-cassadiene C11-alpha-hydroxylase 1-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4329723, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4329723
    Gene description
    ent-cassadiene C11-alpha-hydroxylase 1-like
    Locus tag
    OSNPB_020569900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4329723 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (22220816..22222494)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (21740286..21741994)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136355071 Neighboring gene oryzalexin D synthase-like Neighboring gene uncharacterized LOC107279928 Neighboring gene ent-cassa-12,15-diene synthase-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CYP76M7 is an ent-cassadiene C11alpha-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice. Swaminathan S, et al. Plant Cell, 2009 Oct. PMID 19825834, Free PMC Article
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. CYP76M7 is an ent-cassadiene C11alpha-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice.
      Title: CYP76M7 is an ent-cassadiene C11alpha-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ent-cassadiene C11-alpha-hydroxylase 1-like
    Names
    OSJNBa0008E01.17
    Os02g0569900
    P0025F02.46
    putative Cyt-P450 monooxygenase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      22220816..22222494
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015768107.3 → XP_015623593.1  ent-cassadiene C11-alpha-hydroxylase 1-like

      UniProtKB/TrEMBL
      A2X6A0, A3A869, Q6YTE2, Q6YV99
      Conserved Domains (1) summary
      cd11073
      Location:62 → 495
      CYP76-like; cytochrome P450 family 76 and similar cytochrome P450s
    Nucleotide Protein
    Heading Accession and Version

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