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    LOC4336804 probable purine permease 11 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4336804, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4336804
    Gene description
    probable purine permease 11
    Locus tag
    OSNPB_040587400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4336804 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (30167272..30168832)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (29660864..29662527)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene putative invertase inhibitor Neighboring gene probable purine permease 11 Neighboring gene probable purine permease 11 Neighboring gene uncharacterized LOC136355973

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables purine nucleoside transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable purine permease 11
    Names
    Os04g0587400

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      30167272..30168832
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015781459.3 → XP_015636945.1  probable purine permease 11

      UniProtKB/TrEMBL
      A0A0P0WED6, B8ATD6, Q7X7S4
      Conserved Domains (1) summary
      pfam16913
      Location:107 → 422
      PUNUT; Purine nucleobase transmembrane transport
    Nucleotide Protein
    Heading Accession and Version

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