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    HKT2;1 cation transporter HKT1-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4341971, updated on 10-Oct-2024

    Summary

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    Gene symbol
    HKT2;1
    Gene description
    cation transporter HKT1-like
    Locus tag
    OSNPB_060701700
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    HKT1; OsHKT1; OsHKT2;1; Ni-OsHKT1; Po-OsHKT1; P0596H10.9
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    Genomic context

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    See HKT2;1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (30405667..30407932, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (29538938..29541213, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107281384 Neighboring gene probable cation transporter HKT9 Neighboring gene uncharacterized LOC136357070 Neighboring gene auxin-induced protein 10A5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. T-DNA Tagging-Based Gain-of-Function of OsHKT1;4 Reinforces Na Exclusion from Leaves and Stems but Triggers Na Toxicity in Roots of Rice Under Salt Stress. Oda Y, et al. Int J Mol Sci, 2018 Jan 12. PMID 29329278, Free PMC Article
    2. The Rice High-Affinity Potassium Transporter1;1 Is Involved in Salt Tolerance and Regulated by an MYB-Type Transcription Factor. Wang R, et al. Plant Physiol, 2015 Jul. PMID 25991736, Free PMC Article
    3. Two types of HKT transporters with different properties of Na+ and K+ transport in Oryza sativa. Horie T, et al. Plant J, 2001 Jul. PMID 11489190
    4. Plant and yeast cornichon possess a conserved acidic motif required for correct targeting of plasma membrane cargos. Rosas-Santiago P, et al. Biochim Biophys Acta Mol Cell Res, 2017 Oct. PMID 28723420
    5. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. roots of OsHKT1;4 overexpressed plants suffered heavier damages from Na which excessively accumulated in the root due to increased activity of Na uptake and Na exclusion in the vasculature.
      Title: T-DNA Tagging-Based Gain-of-Function of OsHKT1;4 Reinforces Na Exclusion from Leaves and Stems but Triggers Na Toxicity in Roots of Rice Under Salt Stress.
    2. OsHKT1;1 has a role in controlling sodium concentration and preventing sodium toxicity in leaf blades and is regulated by the OsMYBc transcription factor.
      Title: The Rice High-Affinity Potassium Transporter1;1 Is Involved in Salt Tolerance and Regulated by an MYB-Type Transcription Factor.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in monoatomic cation transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cation transporter HKT2-1
    Names
    HKT-type transporter
    LOC_Os06g48810
    cation transporter HKT1
    cation transporter HKT2;1
    putative sodium transporter
    sodium ion transporter

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001421874.1 → NP_001408803.1  cation transporter HKT2-1

      Status: VALIDATED

      Source sequence(s)
      AB061311, AP014962
      UniProtKB/Swiss-Prot
      A0A0P0X0T3, A2YGP9, Q0D9S3, Q6TPH3, Q7GC01, Q8L6H6, Q8W1B8, Q9FPN6
      UniProtKB/TrEMBL
      A0A6F8FGB9

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      30405667..30407932 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0D9S3.1 GenPept UniProtKB/Swiss-Prot:Q0D9S3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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    Research Materials