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    LOC4327387 osmotin-like protein [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4327387, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4327387
    Gene description
    osmotin-like protein
    Locus tag
    OSNPB_010839900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4327387 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (36654947..36655990, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (36029817..36030964, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136356263 Neighboring gene transfer RNA arginine (anticodon CCG) Neighboring gene ubiquitin-conjugating enzyme E2 7 Neighboring gene heat shock 70 kDa protein 4 Neighboring gene uncharacterized LOC4327389

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    osmotin-like protein
    Names
    Os01g0839900
    P0031D11.36
    P0408C03.11
    putative thaumatin-like cytokinin-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      36654947..36655990 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015762600.3 → XP_015618086.1  osmotin-like protein

      UniProtKB/TrEMBL
      A0A8J8Y991, A2WWU4, A2ZZF2, D7S0L8, Q7F5M0, Q943L0
      Conserved Domains (1) summary
      cd09218
      Location:28 → 246
      TLP-PA; allergenic/antifungal thaumatin-like proteins: plant and animal homologs
    Nucleotide Protein
    Heading Accession and Version

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