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    LOC4344457 GDP-mannose transporter GONST1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344457, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4344457
    Gene description
    GDP-mannose transporter GONST1
    Locus tag
    OSNPB_080107400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4344457 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (366188..371636, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (361152..366603, complement)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene disease resistance protein RGA5 Neighboring gene uncharacterized LOC4344455 Neighboring gene probable polygalacturonase Neighboring gene uncharacterized LOC4344458 Neighboring gene uncharacterized LOC136351392 Neighboring gene uncharacterized LOC4344459

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GDP-fucose transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GDP-mannose transporter GONST1
    Names
    Os08g0107400
    P0450B04.20-1
    putative GDP-Mannose transporter

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      366188..371636 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015795163.3 → XP_015650649.1  GDP-mannose transporter GONST1 isoform X1

      UniProtKB/TrEMBL
      A0A0P0XAV1, Q6ZD70
      Conserved Domains (1) summary
      COG5070
      Location:93 → 393
      VRG4; Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

    2. XM_066303554.1 → XP_066159651.1  GDP-mannose transporter GONST1 isoform X2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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