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    LOC4331177 calmodulin-binding receptor-like cytoplasmic kinase 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331177, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4331177
    Gene description
    calmodulin-binding receptor-like cytoplasmic kinase 2
    Locus tag
    OSNPB_020821400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1119_A01.8
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    Genomic context

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    See LOC4331177 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (35761988..35764067, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (35263226..35265658, complement)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL28z Neighboring gene small nucleolar RNA R24 Neighboring gene zinc finger protein 11 Neighboring gene protein DETOXIFICATION 35 Neighboring gene transfer RNA leucine (anticodon CAA)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calmodulin-binding receptor-like cytoplasmic kinase 2
    Names
    Os02g0821400
    P0474F11.23
    receptor protein kinase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      35761988..35764067 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015768211.3 → XP_015623697.1  calmodulin-binding receptor-like cytoplasmic kinase 2

      UniProtKB/TrEMBL
      A0A0P0VRB6, A2XB48, Q6K703, Q6KA12
      Conserved Domains (1) summary
      cl21453
      Location:154 → 421
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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