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    LOC4343195 probable plastid-lipid-associated protein 12, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4343195, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4343195
    Gene description
    probable plastid-lipid-associated protein 12, chloroplastic
    Locus tag
    OSNPB_070470700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1103_E04.105
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    Genomic context

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    See LOC4343195 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (17022546..17028043)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (16857067..16862644)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136357428 Neighboring gene zinc finger BED domain-containing protein RICESLEEPER 2-like Neighboring gene uncharacterized LOC4343196 Neighboring gene uncharacterized LOC4343197 Neighboring gene serine/threonine-protein kinase/endoribonuclease IRE1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    probable plastid-lipid-associated protein 12, chloroplastic
    Names
    Os07g0470700
    plastid-lipid associated protein PAP/fibrillin family-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      17022546..17028043
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015789721.3 → XP_015645207.1  probable plastid-lipid-associated protein 12, chloroplastic

      UniProtKB/TrEMBL
      A0A0P0X5W5, B8B5Y0, Q0D6K6
      Conserved Domains (1) summary
      pfam04755
      Location:66 → 243
      PAP_fibrillin
    Nucleotide Protein
    Heading Accession and Version

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