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    LOC4340723 uncharacterized LOC4340723 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4340723, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4340723
    Gene description
    uncharacterized LOC4340723
    Locus tag
    OSNPB_060269300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4340723 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (9153074..9157338, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (8977312..8981627, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene EID1-like F-box protein 3 Neighboring gene uncharacterized LOC4340722 Neighboring gene uncharacterized LOC136356798 Neighboring gene uncharacterized LOC136356799

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4340723
    Names
    NHL repeat-containing protein-like
    OSJNBa0084K06.11
    Os06g0269300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      9153074..9157338 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066311802.1 → XP_066167899.1  uncharacterized protein LOC4340723 isoform X2

    2. XM_015788940.3 → XP_015644426.1  uncharacterized protein LOC4340723 isoform X1

      UniProtKB/TrEMBL
      A0A0P0WV63, B8B0E0, Q0DD03, Q5Z6M0
      Conserved Domains (2) summary
      cd05819
      Location:96 → 138
      NHL; NHL repeat [structural motif]
      cl18310
      Location:96 → 237
      NHL; NHL repeat unit of beta-propeller proteins
    Nucleotide Protein
    Heading Accession and Version

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