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    LOC4352121 ASI1-immunoprecipitated protein 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4352121, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4352121
    Gene description
    ASI1-immunoprecipitated protein 2
    Locus tag
    OSNPB_120433133
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4352121 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (14441093..14448443, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (14012927..14020348, complement)

    Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase ATL6 Neighboring gene E3 ubiquitin-protein ligase EL5-like Neighboring gene serine/threonine-protein kinase TIO Neighboring gene uncharacterized LOC136354834

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ASI1-immunoprecipitated protein 2
    Names
    Os12g0433133
    Os12g0433200

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

      Range
      14441093..14448443 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066306287.1 → XP_066162384.1  ASI1-immunoprecipitated protein 2 isoform X4

    2. XM_066306286.1 → XP_066162383.1  ASI1-immunoprecipitated protein 2 isoform X3

    3. XM_015764729.3 → XP_015620215.1  ASI1-immunoprecipitated protein 2 isoform X2

      UniProtKB/TrEMBL
      B9GCX8
      Conserved Domains (1) summary
      cl22851
      Location:312 → 352
      PHD_SF; PHD finger superfamily

    4. XM_026022003.2 → XP_025877788.1  ASI1-immunoprecipitated protein 2 isoform X1

      UniProtKB/TrEMBL
      B9GCX8
      Conserved Domains (1) summary
      cl22851
      Location:312 → 352
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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