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    LOC4330240 uncharacterized LOC4330240 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330240, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4330240
    Gene description
    uncharacterized LOC4330240
    Locus tag
    OSNPB_020665200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1486_E07.1
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    Genomic context

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    See LOC4330240 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (27496846..27501688)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (27010394..27015245)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene NADP-dependent malic enzyme 3 Neighboring gene elicitor-responsive protein 1-like Neighboring gene subtilisin-like protease 1 Neighboring gene U-box domain-containing protein 33

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S-adenosyl-L-methionine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4330240
    Names
    Os02g0665200
    P0461B08.16
    mitochondrial substrate carrier family protein U
    mitochondrial substrate carrier protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      27496846..27501688
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015772208.3 → XP_015627694.1  uncharacterized protein LOC4330240

      UniProtKB/TrEMBL
      A0A0N7KFU3, Q6ESH9
      Conserved Domains (2) summary
      PTZ00168
      Location:338 → 603
      PTZ00168; mitochondrial carrier protein; Provisional
      pfam00153
      Location:518 → 608
      Mito_carr; Mitochondrial carrier protein

    2. XM_015772207.3 → XP_015627693.1  uncharacterized protein LOC4330240

      UniProtKB/TrEMBL
      A0A0N7KFU3, Q6ESH9
      Conserved Domains (2) summary
      PTZ00168
      Location:338 → 603
      PTZ00168; mitochondrial carrier protein; Provisional
      pfam00153
      Location:518 → 608
      Mito_carr; Mitochondrial carrier protein
    Nucleotide Protein
    Heading Accession and Version

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