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    LOC4325008 uncharacterized protein At5g08430 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325008, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4325008
    Gene description
    uncharacterized protein At5g08430
    Locus tag
    OSNPB_010884500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4325008 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (39043452..39054993, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (38413168..38424679, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136354785 Neighboring gene NAC domain-containing protein 48-like Neighboring gene U-box domain-containing protein 4 Neighboring gene transfer RNA serine (anticodon AGA) Neighboring gene uncharacterized LOC4324878

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein At5g08430
    Names
    B1065E10.54
    Os01g0884500
    zinc finger (CCCH-type) protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      39043452..39054993 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066306493.1 → XP_066162590.1  uncharacterized protein At5g08430 isoform X4

    2. XM_066306489.1 → XP_066162586.1  uncharacterized protein At5g08430 isoform X2

    3. XM_066306499.1 → XP_066162596.1  uncharacterized protein At5g08430 isoform X6

    4. XM_066306490.1 → XP_066162587.1  uncharacterized protein At5g08430 isoform X3

    5. XM_066306497.1 → XP_066162594.1  uncharacterized protein At5g08430 isoform X5

    6. XM_066306486.1 → XP_066162583.1  uncharacterized protein At5g08430 isoform X1

      UniProtKB/TrEMBL
      A0A0P0VBB3, Q0JH46, Q5N7H4
    Nucleotide Protein
    Heading Accession and Version

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