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    LOC4335956 23.2 kDa heat shock protein-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4335956, updated on 6-Jun-2024

    Summary

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    Gene symbol
    LOC4335956
    Gene description
    23.2 kDa heat shock protein-like
    Locus tag
    OSNPB_040445100
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    HSP23.2; OsHsp23.2; OsJ_14939
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    Genomic context

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    See LOC4335956 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (22200985..22201935)

    Chromosome 4 - NC_029259.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein ALFIN-LIKE 4-like Neighboring gene potassium channel KOR2-like Neighboring gene uncharacterized LOC112938630 Neighboring gene uncharacterized LOC4335957 Neighboring gene uncharacterized LOC4335958

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029259.1 Chromosome 4 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein complex oligomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to heat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to hydrogen peroxide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to salt stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    23.2 kDa heat shock protein
    Names
    LOC_Os04g36750
    OSJNBa0027P08.9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001419362.1 → NP_001406291.1  23.2 kDa heat shock protein precursor

      Status: VALIDATED

      Source sequence(s)
      AK063700, AU222543, CI060183
      UniProtKB/Swiss-Prot
      A0A0P0WAP6, Q7XUW5
      UniProtKB/TrEMBL
      A2XTX1, Q01J40

    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029259.1 Reference IRGSP-1.0 Primary Assembly

      Range
      22200985..22201935
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015778218.2 → XP_015633704.1  23.2 kDa heat shock protein

      UniProtKB/Swiss-Prot
      Q7XUW5
      Conserved Domains (1) summary
      cd06472
      Location:77 → 172
      ACD_ScHsp26_like; Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7XUW5.2 GenPept UniProtKB/Swiss-Prot:Q7XUW5

    Gene LinkOut

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