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    LOC4336475 uncharacterized protein At4g19900 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4336475, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4336475
    Gene description
    uncharacterized protein At4g19900
    Locus tag
    OSNPB_040529700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (27007922..27009429)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (26504093..26506557)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase II C-terminal domain phosphatase-like 1 Neighboring gene lanC-like protein GCL2 Neighboring gene probable polyol transporter 4 Neighboring gene uncharacterized LOC4336478

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein At4g19900
    Names
    Os04g0529700

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      27007922..27009429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015781258.3 → XP_015636744.1  uncharacterized protein At4g19900

      UniProtKB/TrEMBL
      A0A0P0WCV7, A0A8J8Y218, B8ASC9, B9FGA0, Q00RJ5, Q0JBJ1, Q7X8S1
      Conserved Domains (2) summary
      pfam04572
      Location:334 → 459
      Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
      cl19952
      Location:190 → 311
      Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    Nucleotide Protein
    Heading Accession and Version

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